Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1150 ATGTCTCGCACTTGCTCGCAGTGTGGCAACAATGGCCATAACTCCCGTACATGCATCCACGGCGGCGCCGATGGTTCGTCTAAAGAGAACGGGATTATGCTGTTCGGCGTGCGACTCACTCAAGGGAACTCGTTCAGGAAGAGCGCTAGTATGACGAATCTGTCGCAGTTTGAGGCTCAAGCTCAGGATTTCAACGCCGTCGACGCTGGTTACGCTTCCGACGACGTCGTTCACGCCTCCGGACGGAGTCGCGAGCGTAAGAGAGGTGTTCCCTGGACGGAAGAAGAGCATAGGTTATTCCTATTGGGATTACAGAAAGTCGGAAAAGGAGATTGGAGAGGGATTTCTAAGAACTTCGTCAAAACTCGGACGCCGACTCAGGTGGCGAGTCATGCTCAGAAGTACTTCCTTCGTCGCCACAACCAGAAACGGAGACGCCGGAGATCTAGTCTCTTCGACATCACCACCGATACTGTGATGAAATCCTCTTTAATGGAAGAAGAACAAGTTCACCAAGAAACGGCGATACCGCCCACACATCCACAGTTATATTACGGAGGCTTTCCGAGCTCAACTTTTCAGACGAAGGTGATGGCCGGCGAGAGACCATCGAAGCCTATTAGGCCGATGCCAATCCTACCAGTTCCTCCGTCATCGAAAATGGCCACTCTGAATTTGAAAGACAAAGTTACATTAGATCCCCTACCATTATCGCTGAAGCTGCCAACATCGCCGTCAACATCAAATGAGAAATCACCGACAACAAGCCAGTCAGCGCCATCACCGGATTTTCAGGCTATGTCCGGCAAGTTCAGCGGCGGTGGAGATAGCATAATCAGCGTGGCTTGA 849 0.5147 MSRTCSQCGNNGHNSRTCIHGGADGSSKENGIMLFGVRLTQGNSFRKSASMTNLSQFEAQAQDFNAVDAGYASDDVVHASGRSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRHNQKRRRRRSSLFDITTDTVMKSSLMEEEQVHQETAIPPTHPQLYYGGFPSSTFQTKVMAGERPSKPIRPMPILPVPPSSKMATLNLKDKVTLDPLPLSLKLPTSPSTSNEKSPTTSQSAPSPDFQAMSGKFSGGGDSIISVA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1150 282 SMART sant 88 138 IPR001005 -
Lele52g1150 282 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Lele52g1150 282 MobiDBLite consensus disorder prediction 235 282 - -
Lele52g1150 282 Gene3D - 90 141 - -
Lele52g1150 282 CDD SANT 91 136 IPR001005 -
Lele52g1150 282 FunFam transcription factor MYB1R1 90 141 - -
Lele52g1150 282 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
Lele52g1150 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Lele52g1150 282 ProSiteProfiles SANT domain profile. 87 140 IPR017884 -
Lele52g1150 282 PANTHER TRANSCRIPTION FACTOR KUA1 1 246 - -
Lele52g1150 282 SUPERFAMILY Homeodomain-like 86 139 IPR009057 -
Lele52g1150 282 MobiDBLite consensus disorder prediction 240 265 - -
Lele52g1150 282 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 87 138 IPR006447 GO:0003677
Lele52g1150 282 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1150 Lele-ChrLele52 8003733 8004786 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele52g1150 Myb_DNA-binding 3.7e-11 CL0123