Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1122 ATGGAAGAACATCTCAGTCCACTTGCTGTTACTCATCTCCTTCAACACACTCTCAGAAGCTTGTGCATTCATGAAAATTCCCAATGGGTTTATGCTGTCTTCTGGAGGATCTTGCCCAGAAACTACCCTCCACCCAAGTGGGAAGGTCAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAACTGGATTTTGGTGTGGGAAGATGGTTTCTGCAACTTTGCTGCTTCATCAGCACCTGAAATCACCTCCGGCGGGGAATGCCCGGCGGCGGCGGCTGGTTCGTCGGTTTACGGCAACTGTGAATTCCAGCACTACCAAGGACTTCAACCAGAGCTTTTCTTCAAGATGTCGCATGAGATCTATAACTATGGAGAAGGGTTGATTGGAAAAGTTGCTGCAGATCACAGTCACAAATGGATATACAAAGAACCAAATGATCAAGAAATCAACTTCTTGTCAGCGTGGCACAATTCAGCAGACTCGCACCCAAGGACATGGGAAGCCCAGTTCCAGTCTGGTATAAAGACCATAGCACTTATCGCCGTAAGAGAAGGTGTTGTTCAACTAGGAGCCGTTCACAAGGTGATTGAAGACTTGAGCTATGTGGTACTTCTGAGGAAAAAGTTCAGCTACATTGAGAGTATCCCAGGCGTGCTGTTACCTCACCCATCATCTTCTGCATACCCTTACAAGGTTGAAGGTTACGGATCAATCCCTGAACAATGGCAATATTTCCAAGCAAGTCCTCTCATGGCGGCGGCACCACCACCACCACCGGAGCTATATGACCACTTCAACCAGCAGCCTCTGAAAATCACTCCTTCAATGAGCAGCCTTGAAGCTCTTCTCTCTAAGCTTCCTTCTGTTGTACCTCCACCACCACCACCACCAACAACAACACATGAGCCAGATTATCCTCATCCTCATCCTCATCATTATCATCACCATCAAAGGCCCTTGGAGTTCATGGGAATGCAAAAAGCAGCAAAAGAAGAGATTGATAATGATCAGGAGGTTTATAGGCCAGAGCTTGATGTTGGTGAGAGCAGCAGTTCCATACCAGAAGGATACAGCCATCATCAGCAGCAGCAGCAGCATTTCCAAGATAAGAATTTGACAAGTAATGGAGCCAATCATGGGTTTTGA 1149 0.4682 MEEHLSPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASSAPEITSGGECPAAAAGSSVYGNCEFQHYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFQSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGYGSIPEQWQYFQASPLMAAAPPPPPELYDHFNQQPLKITPSMSSLEALLSKLPSVVPPPPPPPTTTHEPDYPHPHPHHYHHHQRPLEFMGMQKAAKEEIDNDQEVYRPELDVGESSSSIPEGYSHHQQQQQHFQDKNLTSNGANHGF 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1122 382 MobiDBLite consensus disorder prediction 288 304 - -
Lele52g1122 382 MobiDBLite consensus disorder prediction 352 382 - -
Lele52g1122 382 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 210 IPR025610 -
Lele52g1122 382 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 366 - -
Lele52g1122 382 MobiDBLite consensus disorder prediction 287 318 - -
Lele52g1122 382 MobiDBLite consensus disorder prediction 346 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1122 Lele-ChrLele52 7672460 7674777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1122 15 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.457 8.07e-16 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1122 52 7672460 7674777 Lele52g1122 52 7672460 7674777 ECH
Lele49g1069 49 6925712 6927946 Lele52g1122 52 7672460 7674777 hybridization
Lele50g1158 50 7809034 7811329 Lele52g1122 52 7672460 7674777 hybridization