Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1120 ATGAATATAAGAAGCAAGAAGGATATCGAGGAAATAATTACCCTTTCACCCTTAATGGCATCAAGATCATATGCAAATCTCGTAGACTTGGTTAGTGGAGGCTTATTTGATGTTCCTCACACCCCAAGACCTCTTCCAAGAGTTATGACAGTTCCTGGAATTATTTCTGACCCAGATGGTCATGGTAATAATGATGCGGATTCAGATGCTAGCTCGTCTGGGTGTCGGGAGCGGAAAATAATAGTGGCAAACATGCTGCCATTACAGGCTAAAAGAGATGCAGAATCTGCTAAATGGTGTTTCAGTTTAGATGAGGATTCAATTTTATTACAATTGAAAGATGGTTTTTCTCCTGATACTGAGGTTATCTATGTGGGTTCTTTGAAAGTTGAAATAGATCCTCGTGAGCAGGATGAAGTTGCTCAGAAACTACTGGAGGATTTCAATTGTGTACCTACCTTTTTACCACATGAACTCCAGAAGAGGTTTTATCTTGGCTTTTGTAAGCAACAACTTTGGCCCCTATTCCATTATATGCTACCTATGTGCCCAGATCACGGTGACCGTTTTGACCGCATGCTTTGGCAGGCTTATGTTTCTGCAAATAAAATATTTTCAGACAAGATTATGGAAATAATCAATCCTGATGAGGATTTTGTTTGGGTTCATGACTATCACTTGATGGTTTTGCCGACATTTCTTAGGAAGCGATTTAATCGAGTTAAACTTGGATTCTTCCTCCACAGTCCTTTCCCTTCATCTGAAATTTACAGAACTCTGCCTGTACGAGATGAAATTCTGAAGGGACTGTTGAATTCGGACTTAATTGGTTTTCATACATTCGATTATGCCCGTCACTTCCTCTCTTGCTGCAGCAGAATGCTGGGTCTAGACTATGAATCTAAGCGGGGACATATAGGTCTTGATTACTTTGGCCGCACTGTATATATTAAAATTTTGCCTGTTGGCATTCACATGGGCAGACTTGAATCTGTATTAAATCTCCCTTCTACATCTGCTAAAATAAAAGAGATTCAGGAAGAGTTTAAGGGTAGGAAGATGATTCTTGGTGTCGATGATATGGATATCTTTAAGGGCATCAATTTGAAACTTCTGGCTATGGAGCAGCTGCTGCAGCAGAACCCAGACTTCCTGGGAAAGGTCGTCCTAGTTCAAATTATAAATCCTGCGAGGGGTTCAGGGAAGGATGTTCAAGAAGCAAAGAAGGAAACGAATTTAATTGCTGAAAGGATCAATGGTACATATGGCTCAAAACATTATCAACCTGTTGTTCTCATTGACCGTCCTGTTCTTCGCTTTGAAAAAAGCGCCTATTATGCTGTAGCAGAGTGTTGCATTGTCAATGCTGTGAGAGATGGTATGAACTTAGTCCCATACAAATATGTAGTCTGCAGACAAGGAACTACTCAACTGGATAAAGCATTGGGTAGAAAAAGTGATTCCCCTCATACAGGCATGCTTGTTGTCTCTGAGTTCATTGGTTGTTCCCCTTCTCTAAGTGGAGCAATTAGGGTCAATCCCTGGGATATTGATGCAGTTGCTGATGCAATGTATTTGGCCGTTACAACCAGTGATTCAGAGAAGCAATTGAGGCATGAGAAACACTATCGATATGTCAGTTCTCATGATGTGGCTTATTGGGCCCGCAGCTTCATGCAGGATTTGGAGAGGGCATGCGCAGATCATTACACCAAAAGGTGTTGGGGAATTGGTTTGGGCCTAGGGTTTAGAGTTGTTTCTCTTTCTCCTGGTTTTAGGAGGTTGTCCATTGACCCTGTTGTTTCAGCTTATAAAAGAACTAATAGAAGGGCCATATTTCTTGATTATGATGGTACAATTATTCCACACTCTTCTATAAATAAAATCCCCAGCTCTGAAGTCATATCCGTGCTGAATACCCTGTGTAATGATGCCAAGAACAGTGTGTTCATTGTCAGTGGAAGGGGAAGAGATTCTCTTAATGAGTGGTTTGCTTCATGCAAGAGGCTGGGACTTGCGGCTGAACATGGTTACTTTTTAAGGTGGAATGGAGACTCAGAATGGGAAACCAGTCACTTGTCTGCTGATCTTGAATGGAAAAATATAGTGGAGCCTGTCATGACTTCATATACAGAGGCAACTGATGGGTCTATTATTGAAACTAAAGAAAGTGGTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGATCCTGCCAAGCTAAGGAGTTGTTGGATCACCTTGAAAGCGTGCTTGCTAATGAACCAGCTGTCGTTATGAGGGGCCATCATATCGTGGAAGTCAAGCCACAGGGAATAAGCAAGGGTTTAGTAGCGGAGAACGTTCTCTCCACGCTGGTAGATGGCGGGAATCTACCAGATTTTGTGATGTGCATCGGAGATGACAGGTCAAACGAAGACATGTTCGAGAGCATATCAAGGATAGTCTCTTGTCCTTCATTGCCAGTTGCTCCAGAGGTCTTTGCTTGCACTGTTGGTAGCAAGCCTAGCAAAGCCAAGTATTATCTTGATGATACTGCTGATGTTATAAAATTGCTTAAAGGCCTTGCAGCTGCATCAAATCCAAAACCAAGGCAACCGCCCCAGTTCAAGGTTTCTTTTGAAAGCACAGCTTGA 2640 0.4208 MNIRSKKDIEEIITLSPLMASRSYANLVDLVSGGLFDVPHTPRPLPRVMTVPGIISDPDGHGNNDADSDASSSGCRERKIIVANMLPLQAKRDAESAKWCFSLDEDSILLQLKDGFSPDTEVIYVGSLKVEIDPREQDEVAQKLLEDFNCVPTFLPHELQKRFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRMLWQAYVSANKIFSDKIMEIINPDEDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLNLPSTSAKIKEIQEEFKGRKMILGVDDMDIFKGINLKLLAMEQLLQQNPDFLGKVVLVQIINPARGSGKDVQEAKKETNLIAERINGTYGSKHYQPVVLIDRPVLRFEKSAYYAVAECCIVNAVRDGMNLVPYKYVVCRQGTTQLDKALGRKSDSPHTGMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMYLAVTTSDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACADHYTKRCWGIGLGLGFRVVSLSPGFRRLSIDPVVSAYKRTNRRAIFLDYDGTIIPHSSINKIPSSEVISVLNTLCNDAKNSVFIVSGRGRDSLNEWFASCKRLGLAAEHGYFLRWNGDSEWETSHLSADLEWKNIVEPVMTSYTEATDGSIIETKESGLVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVMRGHHIVEVKPQGISKGLVAENVLSTLVDGGNLPDFVMCIGDDRSNEDMFESISRIVSCPSLPVAPEVFACTVGSKPSKAKYYLDDTADVIKLLKGLAAASNPKPRQPPQFKVSFESTA 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1120 879 TIGRFAM T6PP: trehalose-phosphatase 608 857 IPR003337 GO:0003824|GO:0005992
Lele52g1120 879 Gene3D - 739 868 IPR023214 -
Lele52g1120 879 Gene3D - 609 726 IPR023214 -
Lele52g1120 879 MobiDBLite consensus disorder prediction 53 74 - -
Lele52g1120 879 CDD HAD_TPP 611 852 - -
Lele52g1120 879 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 78 566 - -
Lele52g1120 879 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 611 817 IPR006379 -
Lele52g1120 879 FunFam Alpha,alpha-trehalose-phosphate synthase 332 547 - -
Lele52g1120 879 Gene3D Glycogen Phosphorylase B; 71 330 - -
Lele52g1120 879 Pfam Trehalose-phosphatase 613 847 IPR003337 GO:0003824|GO:0005992
Lele52g1120 879 Gene3D Glycogen Phosphorylase B; 331 547 - -
Lele52g1120 879 SUPERFAMILY HAD-like 610 858 IPR036412 -
Lele52g1120 879 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 46 859 IPR001830 GO:0003824|GO:0005992
Lele52g1120 879 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 739 870 - -
Lele52g1120 879 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 71 330 - -
Lele52g1120 879 CDD GT20_TPS 78 563 IPR001830 GO:0003824|GO:0005992
Lele52g1120 879 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 609 726 - -
Lele52g1120 879 Pfam Glycosyltransferase family 20 78 563 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1120 Lele-ChrLele52 7635703 7643247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1120 19 879 Trehalose Biosynthesis Gene Families AT1G60140 72.590 0.0 1353