LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele52g1119	ATGGATCTGAGCAGAGAAATTCGTCCAAACTCTGCTAAGAAACTACCATGGAAGACGGTTCTAACTCTGGCATATCAGAGCCTTGGAGTTGTCTATGGAGATTTAAGCATTTCACCACTATATGTGTACAGAAGCACATTTGCTGAAGATATCGATCACACAGAGAACAACGAAGAGATTTATGGTGTTTTCTCTTTGGTTTTCTGGGCTCTTACATTGGTTCCTTTAATCAAATACGTGTTTATTGTGCTCAAAGCTGATGATAATGGAGAAGGAGGCACATTTGCTTTATACTCATTGCTGTGTCGCCATGCCCGAGTCAACTCTCTGCACAATCGGCAAACGGCAGACGAAGAGCTCTCAGGGTACCACAAGAAGGGATATGGTAATGGAACAACAGAAAGATGCTTTGCCTCGATGATGAAGATGGCTTTGGAGAAGCATAAGGTTTTGCAGAAGATTTTGCTGGTTCTGGCTTTGATTGGGACTAGCATGGTGATAGGTGATGGGGTCTTTACACCATCTCTTATGGTTCTGTCTGCTGTGTCTGGTCTTGAGCTTTCAGTGGCCAAGGAGCATCACCGATATGTAGAAATTCCGGCTACATGCATCATATTGATAGGCTTGTTTGCTCTGCAACATTATGGCACTCACAGGGTTGGTTTCTTGTTTGCTCCAATAATTATCACATGGCTTTTGTGCATCAGTGCTATTGGTGTTTATAATATATTTTACTGGAATCCTCAAGTATATGTAGCACTCTCTCCATATTTTGTTTACCGATTTTTGAGGAAATCACGAGGAGAAAAATGGGTGTCCCTTGGTGGAATTTTGTTGTGCATAACAGGATCCGAAGCCATGTTTGCTGATCTCGGCCACTTTTCACAATTATCAATCAAGCTTGCATTCACCTCTGTGGTTTATCCATCGATAGTTCTTGCATATATGGGCCATGCTGCTTATCTATCTAAACATCACCACATCGTCCATGGCTATCACTTTGGGTTTTACGCATCCGTACCGGATAAACTGAGATGGCCTGTTCTGGTAATAGCCATACTTGCTGCAGTTGTGGGAAGCCAAGCCATCATCACCGCGACCTTCTCAATTATCAAGCAATGCGTGGCATTAAGCTGCTTCCCGAGAGTTAAAGTGGTACATACATCGTCGACAATTCACGGCCAAATATATATCCCCGAGATCAACTGGCTACTGATGTTGTTGTGCTTGGCTGTAACTCTCGGTTTCAGAGACACCAAGCACTTGGGTAATGCAGCAGGTTTGGCGGTTATAACGGTTATGCTGGTCACAACTATTTTGATGTCACTGATTATAGCAGTGTGCTGGAAGAAGAGATTTCTCCTTGCTCTTGGTTTTGTTGTTATATTTAGCACCATTGAAGCTGTCTTCTTCTCAGCTTCTCTTACCAAGTTCCTTGAAGGCGCATGGGTTTCAATTGCTTTGGCCTTTGTATTTCTCACTGTCATGTATATCTGGCACTATGGCACCCTTAAGAAGTATGAATTTGATGTCCAAAACAAGGTCTCCATCAACTGGCTTCTCGGCCTAAGTCCCAGCATCGGCATTGTCCGGGTGCGAGGGATCAGCCTAATTCAGACCGATCTCGTTTCTGGAATCCCTGGGATCTTCTCCCACTTCGTGACCAACCTTCCAGCATTCCACCAAGTCATAGTCTTTCTCTGCATCAAGCATGTGCCGGTTCCTCATGTCTCGCCTAAGGAACGGTTCCTAGTAGGTCGAATAGGACCAAGAGAGTTCAGACTCTACCAGTGCATAGTGCGCTATGGTTACTGCAATGTCCACAAAGAAGACATCGAGTTCGAGAAAGATCTCGTGTGCAGCATAGCAGAGTTCATTCGCACGGGAAACACTAGTACTCCCGATTTCAACCCTGCCTCTTCTCCAAGCGAAGAGCTCGAACAAAATCAGAAAATGGCGATTGTAGGGACATGTTCCACACATACTACCATAACAATGAGCGAGGACGCTAAGAATAATCATAACGGCATAGACTCAACTGAGATGTCTGAAATCCAACAACCCAAGAAGCGGGTGAGATTCGTAGTACCAGAGAGTCCGAGGATCGACCATGATGCCAGAGAAGAACTATACGAGCTCATGGAAGCGAGGGAAGCCGGCATGGTCTACATTACAGGGCAATCTTATATGAGAGCTAAACCAGGATCTAGCTTGCTAAAGAAGTTAGTGATCAATGTTGGGTATGAATTCTTGAGGAAGAACACTAGGGCCCCACCTTATGTCCCTGGTATGCCTCATGCATCATCTTTGGAAGTTGGAATGATATACCAAGTTTGA	2337	0.4454	MDLSREIRPNSAKKLPWKTVLTLAYQSLGVVYGDLSISPLYVYRSTFAEDIDHTENNEEIYGVFSLVFWALTLVPLIKYVFIVLKADDNGEGGTFALYSLLCRHARVNSLHNRQTADEELSGYHKKGYGNGTTERCFASMMKMALEKHKVLQKILLVLALIGTSMVIGDGVFTPSLMVLSAVSGLELSVAKEHHRYVEIPATCIILIGLFALQHYGTHRVGFLFAPIIITWLLCISAIGVYNIFYWNPQVYVALSPYFVYRFLRKSRGEKWVSLGGILLCITGSEAMFADLGHFSQLSIKLAFTSVVYPSIVLAYMGHAAYLSKHHHIVHGYHFGFYASVPDKLRWPVLVIAILAAVVGSQAIITATFSIIKQCVALSCFPRVKVVHTSSTIHGQIYIPEINWLLMLLCLAVTLGFRDTKHLGNAAGLAVITVMLVTTILMSLIIAVCWKKRFLLALGFVVIFSTIEAVFFSASLTKFLEGAWVSIALAFVFLTVMYIWHYGTLKKYEFDVQNKVSINWLLGLSPSIGIVRVRGISLIQTDLVSGIPGIFSHFVTNLPAFHQVIVFLCIKHVPVPHVSPKERFLVGRIGPREFRLYQCIVRYGYCNVHKEDIEFEKDLVCSIAEFIRTGNTSTPDFNPASSPSEELEQNQKMAIVGTCSTHTTITMSEDAKNNHNGIDSTEMSEIQQPKKRVRFVVPESPRIDHDAREELYELMEAREAGMVYITGQSYMRAKPGSSLLKKLVINVGYEFLRKNTRAPPYVPGMPHASSLEVGMIYQV	778

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele52g1119	778	Pfam	K+ potassium transporter	25	605	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele52g1119	778	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	15	777	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele52g1119	778	TIGRFAM	kup: potassium uptake protein	23	778	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele52g1119	Lele-ChrLele52	7615535	7619834	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele52g1119	10	778	Inorganic Solute Cotransporters	AT1G70300	69.359	0.0	1105