Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1115 ATGGGAGTGGATAAAATTGAAGAGAGCAGTGTGAGATTGTTGGCTAATAGCAGCAGCGGTGGAAGCAACGGATCTAGGTGGGTCGATGGGACTGAAGTGGAGTGGGAGTTTACTCCATGGACGGAGGGAAATGAGAATGAAGGATTGAGGTCAATTCGAAGGAGGCTTGTGAAGAAGCCTAAGAGAGTTGATTCACTTGATGTTGAAGCCATGGAGATTTTTGGGAGACACGATCACCACTCCAAGGATCCTTCCTTTTGGACCACACTAGCACTAGCATTTCAGACTCTCGGTGTGGTATATGGTGATATGGGAACAAGTCCCCTATATGTTTTCTCTGATGTGTTCAGCAAGGTTCCGATTGAGTCAGAAATTGATATCTTGGGGGCCTTATCGTTAGTGATGTACACAATAGCAATTATACCCTTGGCAAAGTATGTTTTTATAGTCCTCAAGGCGAATGATAATGGAGAAGGTGGAACATTTGCACTGTACTCACTGATTTGCAGGTATGCAAATGTGAGTCTTCTTCCAAATCGTCAGCAAGCTGATGAGTATATCTCTAGCTTTAAGCTTAAACTACCAACTCCAGAACTGGCAAGGGCTTTGACCATAAAGGAAACTCTGGAAAGAAAGTCATATCTGAAAATCCTTCTGTTGCTGTTGGTTCTGATGGGAACTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGTTTGCAAGGTCAGATTGATGGATTTGATACAAGGGAGGTGGTTATTGTTTCAATTGTAGTCCTTGTGGCTTTGTTCAGCATACAACAGTTTGGAACTGGTAAAGTGGGTTTCATGTTTGCTCCTGCGCTTGCTTTATGGTTCTCTTCTCTGGCTTTGATTGGAATATACAATATATTCAAGTATGACATCAGTGTTCTGAGAGCCTTCAACCCAGCTTATATCTATTATTTCTTTATGAAGAACACCAAAACTGCATGGTCATCTCTTGGCGGTTGTGTTTTGTGCATTACAGGTGCTGAAGCAATGTTTGCTGATCTGGGTCACTTTTCTGTACGATCAATTCAGATTGCCTTTTCTTTTGTTGTATTTCCCTGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTATCTGATGACGCACCCTTATTCTCATTCAAGAATATTCTATGAATCTGTTCCAGAGAGTCTGTTCTGGCCAGTGTTTGTGATAGCCACACTTGCCGCTATGATTGCTAGCCAAGCTATGATATCTGCTACATTTTCATGTGTAAAGCAATCTATGGCTTTGGGCTGCTTTCCAAGGCTCAAGATTATTCACACCTCAAAGAGGTTTATGGGTCAAATATACATCCCTGTAATCAACTATTTTCTGTTGATCATGTGCATAGTAGTTGTTTCCATCTTCCAGAGCACTACTAGCATTGCAAATGCATATGGCATTGCTGAAGTAGGTGTCATGATGGTTAGCACCACCTTGGTGAGTCTTGTAATGCTCCTGATCTGGCAGACCAACCTGTTCCTAGTTTTCGGTTTCCTACTAGTATTCGGATCAGTAGAGCTCGTTTACATGTCTTCCGTCCTATCGAAAATCACAGAGGGTGGCTGGCTTCCACTTGTTTTTGCTTTCTTTTTCCTCTCTATAATGTACACATGGAACTATGGAAGTGTTCTGAAATACCAAAGTGAAGTCAGGGAGAAGATCTCCATGGACCTCATGGTTGATCTTGGCTCCAATCTTGGAACTGTAAGAGTACCAGGAATTGGATTGTTATACAACGAACTCGTCCACGGCATTCCCTCCGTTTTTGCCCAGTTCCTCTTGAGCCTCCCTGCTATCCACTCCACTATAGTTTTTGTTTGCATTAAATATGTTCCAGTCCCAGTGGTCCCTATGGAGGAAAGATTCCTATTTCGAAGAGTCGGTCCAAAAGATTACCACATGTTTCGCTGTGTCGCCCGGTACGGCTACAAAGATGTAAGAAAGGAAGATCACCATGCATTCGAGCAGCTTCTTATCGAAAGCCTGGAGAGATTCTTGAGAAAGGAGGCTCATGATAGTTCCTGGGAGGTCAACAAGAATGAGGACATGGATAGTGTCTCAGTGATATCAAAGGACTCTGACCTTCTTCCCAGTGGCAATGTGTCTGAAGAACTAAGGATTCCATTGATGCAGGGTCAAAAACCAGAAGATACAGGAGCTTCTACTTCTAAGCAACAAGCTTCGATCTCGCTGCCGGCTAGCATCATGTCATCAGATGAAGACCCGAGTGTTGAATATGAGCTCGCTGCTCTAAGGGAAGCGACGGATTCAGGATTCACCTATTTGCTTGGACATGGGGATGTGAAAGCAAAGAAGAACTCCATTTTCATCAAGAAGCTAGTGATCAATTATTTCTATTCATTTCTGAGAAATAATTGCAGAGGTGGTACAGCAAACATGAGAGTTCCTCACACCAACATCATTCAAGTGGGGATGACTTACATGGTCTGA 2514 0.4304 MGVDKIEESSVRLLANSSSGGSNGSRWVDGTEVEWEFTPWTEGNENEGLRSIRRRLVKKPKRVDSLDVEAMEIFGRHDHHSKDPSFWTTLALAFQTLGVVYGDMGTSPLYVFSDVFSKVPIESEIDILGALSLVMYTIAIIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVSLLPNRQQADEYISSFKLKLPTPELARALTIKETLERKSYLKILLLLLVLMGTSMIIGDGILTPAISVMSAISGLQGQIDGFDTREVVIVSIVVLVALFSIQQFGTGKVGFMFAPALALWFSSLALIGIYNIFKYDISVLRAFNPAYIYYFFMKNTKTAWSSLGGCVLCITGAEAMFADLGHFSVRSIQIAFSFVVFPCLLLAYMGQAAYLMTHPYSHSRIFYESVPESLFWPVFVIATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSKRFMGQIYIPVINYFLLIMCIVVVSIFQSTTSIANAYGIAEVGVMMVSTTLVSLVMLLIWQTNLFLVFGFLLVFGSVELVYMSSVLSKITEGGWLPLVFAFFFLSIMYTWNYGSVLKYQSEVREKISMDLMVDLGSNLGTVRVPGIGLLYNELVHGIPSVFAQFLLSLPAIHSTIVFVCIKYVPVPVVPMEERFLFRRVGPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLERFLRKEAHDSSWEVNKNEDMDSVSVISKDSDLLPSGNVSEELRIPLMQGQKPEDTGASTSKQQASISLPASIMSSDEDPSVEYELAALREATDSGFTYLLGHGDVKAKKNSIFIKKLVINYFYSFLRNNCRGGTANMRVPHTNIIQVGMTYMV 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1115 837 Pfam K+ potassium transporter 93 666 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lele52g1115 837 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 82 835 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lele52g1115 837 MobiDBLite consensus disorder prediction 732 759 - -
Lele52g1115 837 TIGRFAM kup: potassium uptake protein 92 837 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lele52g1115 837 MobiDBLite consensus disorder prediction 736 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1115 Lele-ChrLele52 7568862 7577748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1115 3 837 Inorganic Solute Cotransporters AT1G60160 72.825 0.0 1222