Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1111 ATGGACAAACTTGGAGACAAGTTAAGAAGGTCAGATGAAGATTGTATACCTTTGAGCAAGAATGGAAGAGCAAGTGAGACTTTACTAATCTCACTTACAAGCATCAGACTCTATGATAGGGACTTAGTTCAGGCAGTTTATGAATGCCTTGGAACCTACAGCCTTTCAACAGAGGCAGAGGATTCAAGCTTTCTTCAGATAACTATCAAGGAAGTTTATATGGCGACCAACAATCTTAATGCTTCAAATTACATCGGTCAAGGCATAGGTGGCAAAGATAAAGTTCTTTCATGGATTCAGAGGCTTGAGATTGCAGTTGATTGTGCAAGAGGTCTCATGTTTCTCCACACCTATCAAGGTTGCTGCATTATTTACAGTGACATTAAGCCATCAAACATTCTAATTGACACCAACATGCAAGCAAAGCTTTCAGACTTTGGATTGTCCAAGGCAATGGACCTCGACCAATCGTTTGTTAGCTCGAGTTTTGGAATCGTATTACTGCAACTTCTTTCAGGACCGAAGGTCATCAACTTCAATCTCCAGAGACCAATGTCCCTAGATAAAATGGCTAGAAATTTTGCTAGAGGTGGGAATATATCAGAGTTTGCTGATCCTAAACTCAGAGCAGAGTACTCTGCAGAAGCATTTAGCCTCACACTAAAGCTCGCAGGGTCGTGCATAGGGCTTAAACAGCAACGGCCGTCGATGGAGCAAGTTCTTCGAAGCCTAGAGAAGGTCCTGGAAATCACATCACAAGCTAAATCATTCACATCTTTCACAGTGTAA 789 0.4183 MDKLGDKLRRSDEDCIPLSKNGRASETLLISLTSIRLYDRDLVQAVYECLGTYSLSTEAEDSSFLQITIKEVYMATNNLNASNYIGQGIGGKDKVLSWIQRLEIAVDCARGLMFLHTYQGCCIIYSDIKPSNILIDTNMQAKLSDFGLSKAMDLDQSFVSSSFGIVLLQLLSGPKVINFNLQRPMSLDKMARNFARGGNISEFADPKLRAEYSAEAFSLTLKLAGSCIGLKQQRPSMEQVLRSLEKVLEITSQAKSFTSFTV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1111 262 Gene3D Transferase(Phosphotransferase) domain 1 52 161 - -
Lele52g1111 262 Gene3D Transferase(Phosphotransferase) domain 1 162 259 - -
Lele52g1111 262 Pfam Protein kinase domain 93 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1111 262 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1111 262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Lele52g1111 262 PANTHER OS01G0253100 PROTEIN 96 250 IPR045271 -
Lele52g1111 262 SMART serkin_6 47 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1111 262 SUPERFAMILY Protein kinase-like (PK-like) 92 245 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1111 Lele-ChrLele52 7539829 7543323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1111 17 250 Receptor kinase-like Gene Family AT1G30570 33.333 6.82e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Lele52g1111 Pkinase 1.4e-12 CL0016