Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1102 ATGAGGAGCTCCTTCTTCCTTCTCTTTATCCTCTTCTCATCCTTCTCTGTTGGTTTTGCCGGAGCCGGCGGTGATGTCGCTCGGGGTAAAAACCCATTCGCTCCTAAGGCATTCTTGAATCGGTATTGGGATAAGGAGATCCGGAACGGCCTGCCTAAGCCTGAGTTCTTGCTCTCCAAGGCGTCCCCATTGACTGCGGTGGACTCTGCGGCGTTTGCCAAGCTCGCCGCCAGCAACGCTCTTTCCACGCGCCTCCCGGAATTCTGCTCCGCTGCTAACCTGCTCTGTTTTCCCGATTTGGTTCAAAGTCTGGAGAAGCACTCTAAGGATGTGAGCTTTGCTTTGTACCAGGACAAGAACTTCACCAACTATGGGACGGATCGGCTTGGTGGGGTGGACTCTTTTCAGAAATATTCCGAAGGGAAGAATATTCCTGTGAATGATTTCCGGCGATATAGCCGTGACTCCACCGGTCACAAGGACAATTTCCAAAGCTACGCTAGTGATGGCAACGTGGTGGACCAGAGTTTTCACACCTACGCCAGCTCAGCAACAGGCGGCGTCGGCGAATTCAAGAAGTACGCCGATTCCACCAATGTTCCCAATCTTCAATTCACCTCCTACTCCGATGATGCCAACGGAAGAGAGCAATCTTTCACTAGCTACTCCGAGAATGGAAATGCTGGTGACCAATCTTTCACCAACTATGGAAAACACGGGAACGGGGCTGTGAGCGATTTCACAAGCTACGGGACGAACTCGAACGTCGTCGGGTCGGGATTCATGAATTACGGCGAGACTGCGAATGCCGGGAATGAGACATTCACGAATTACGGTGTGAATATGAACAACCCTACCAATACCTTCAAGAACTACGCCTCCGGAGGCAATGGAGCCGCTGAGAGTTTCGCTAATTACAGAGACCAAGCCAATGTGGGAGCCGATTCGTTCCAATCATATGCTAAAGGTGCAAACGTAGCAGAAGTCGATTTCACGAACTACGGCAAATCCTTCAACGAAGGAACAGACAAATTCACCGGCTACGGAAAAGACGGTAATGAGCATAAAATTGGCTTCAAAGGCTATGGGGTGAACAATACCTTCAAGGACTACACGAAAGAAGGCGTCACATTCAAAGGCTACACCAATGTGAGCACCACTCTCAGTTCCATGGCGAAATCTGGTTCAGCCATCAATGGCAATTTGGTAAAAAGGTGGGTAGAACCAGGTAAATTCTTCCGTGAATCGATGTTGAAGAAAGGGACGGTGATGCCTTTCCCGGACATCAGAGATAAAATGCCCAAGAGGTCGTTCTTGCCCCGATCTATCATCTCCAAATTACCTTTCTCGACCTCGAAAATCTCCGAGCTGAAGCAGATTTTCAAAGTGTCTGATAATTCCTCCATGGACAAGATGCTTTCAAGCTCCCTCAGCGAGTGCGAGAGAGCTCCGAGCCCCGGCGAGACCAAGCGCTGCGTCGGCTCCGTCGAGGACATGATCGACTTCGCGACCTCCGTGCTGGGACGCAACGTCATCGTTCGAACCACCCAGAACGTGAACGGGTCGAAGGAAAGCGTGGTAGTGGGTCGGGTCTCGAAGATTAACGGGGGCCAGGTCACCCAGTCCGTATCGTGCCACCAGAGCCTTTTCCCTTACCTGCTTTACTACTGCCACTCCGTCCCCAAAGTCCGGGTCTACGAAGCGGACCTCCATGACCCGAAAACCAAGGCCAAGATCAACCACGGTGTTGCCATCTGTCACCTGGACACCACCGCGTGGAGCCCCACACATGGTGCATTCCTCTCACTCGGATCGGGTCCAGGTCGGATCGAAGTCTGCCACTGGATCTTCGAGAACGACATGACCTGGACCATTGCCGACTAA 1884 0.5196 MRSSFFLLFILFSSFSVGFAGAGGDVARGKNPFAPKAFLNRYWDKEIRNGLPKPEFLLSKASPLTAVDSAAFAKLAASNALSTRLPEFCSAANLLCFPDLVQSLEKHSKDVSFALYQDKNFTNYGTDRLGGVDSFQKYSEGKNIPVNDFRRYSRDSTGHKDNFQSYASDGNVVDQSFHTYASSATGGVGEFKKYADSTNVPNLQFTSYSDDANGREQSFTSYSENGNAGDQSFTNYGKHGNGAVSDFTSYGTNSNVVGSGFMNYGETANAGNETFTNYGVNMNNPTNTFKNYASGGNGAAESFANYRDQANVGADSFQSYAKGANVAEVDFTNYGKSFNEGTDKFTGYGKDGNEHKIGFKGYGVNNTFKDYTKEGVTFKGYTNVSTTLSSMAKSGSAINGNLVKRWVEPGKFFRESMLKKGTVMPFPDIRDKMPKRSFLPRSIISKLPFSTSKISELKQIFKVSDNSSMDKMLSSSLSECERAPSPGETKRCVGSVEDMIDFATSVLGRNVIVRTTQNVNGSKESVVVGRVSKINGGQVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLHDPKTKAKINHGVAICHLDTTAWSPTHGAFLSLGSGPGRIEVCHWIFENDMTWTIAD 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1102 627 ProSiteProfiles BURP domain profile. 412 626 IPR004873 -
Lele52g1102 627 SMART BURP_2 410 626 IPR004873 -
Lele52g1102 627 Pfam BURP domain 412 624 IPR004873 -
Lele52g1102 627 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 14 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1102 Lele-ChrLele52 7470835 7472830 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0924 53 18863300 18867462 Lele52g1102 52 7470835 7472830 CCT
Lele54g0906 54 15578332 15581044 Lele52g1102 52 7470835 7472830 CCT
Lele55g0552 55 3567596 3571555 Lele52g1102 52 7470835 7472830 CCT
Lele52g1102 52 7470835 7472830 Lele52g1102 52 7470835 7472830 ECH
Lele49g1044 49 6718150 6720150 Lele52g1102 52 7470835 7472830 hybridization
Lele50g1135 50 7525322 7527317 Lele52g1102 52 7470835 7472830 hybridization