Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1095 ATGGTCTCCGGCCTACCTCCAGAATTCGTCCGACGACGACCTTATGAGATGACACATGACATGCCGGAGAATGGTGTGTATCCGCAGATTCCGACAATGCCCGTTGAGTATCTAGCGGAGCCACCACAAAATAATCATGTAGACCCAAATAAAGGCTTCTGGACTGCAACAGAACACAGGCTATTCTTGGAAGGACTGGAGAAATATGGAAAGGGAGCTTGGTCGAGTATTTCCAAACATATAGGGACAAGAACATATACTCAAGTAAATAGTCATTCTCAGAAACACTTCTTGCGCCAAAGTGATAATAAGAAAAAGAGAAACCGAGCAAGTATTCATGATATGACTATTGCGGATCTCGTCCCAAGAACTGGAGATCAAAATTACTACTGGCAAAATATTGCTTCTAGTGCTTCAATATTATCAGCGCATCAATCTCAGTTTTACTATCAGAATGCTTCGAATGATCAATTTCTTAGCTTTAAAAATCCAAACAAAATATGCCTCTCTAATCCAGAGACTCTTACAAACCCCAACCCCATACTGCAAGATCAAAATTACTACCAACAAAATATTGATTCGAGTCTTCTAATATTGCCAGTGCATCAATCTCAATTTGACCATCAGAATGTTTGGAATGATCAATCCCTTAGTTTTGGAGATCCAAACACTATATATCTCTCTAATCCAGAGACTCCTATAAACCTCAACCCTATACCTCAAGATCAAAACTACTTCCAGCAAAATATTACTTCGAATCCTCCAATGTTATCAGCACACCAATCTCAATTTGACTATCAGAATTCTTGGAATGATCAATCCATTGGCTTTGGAGATCCAAACAACATATACTTCTCTAATCCAAATAGTCTTGCAAATCTCAACCCCATACCTCAGGATCAATACTATAATCAGCAAAATATTCATTTGAGTTCTCCGATATTGTCAGCTCATCAATCTCAACCTACACACAATCCTTAG 981 0.3884 MVSGLPPEFVRRRPYEMTHDMPENGVYPQIPTMPVEYLAEPPQNNHVDPNKGFWTATEHRLFLEGLEKYGKGAWSSISKHIGTRTYTQVNSHSQKHFLRQSDNKKKRNRASIHDMTIADLVPRTGDQNYYWQNIASSASILSAHQSQFYYQNASNDQFLSFKNPNKICLSNPETLTNPNPILQDQNYYQQNIDSSLLILPVHQSQFDHQNVWNDQSLSFGDPNTIYLSNPETPINLNPIPQDQNYFQQNITSNPPMLSAHQSQFDYQNSWNDQSIGFGDPNNIYFSNPNSLANLNPIPQDQYYNQQNIHLSSPILSAHQSQPTHNP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1095 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 101 IPR017930 -
Lele52g1095 326 SMART sant 50 99 IPR001005 -
Lele52g1095 326 SUPERFAMILY Homeodomain-like 50 101 IPR009057 -
Lele52g1095 326 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 53 100 IPR006447 GO:0003677
Lele52g1095 326 PANTHER TRANSCRIPTION FACTOR KUA1 48 217 - -
Lele52g1095 326 ProSiteProfiles SANT domain profile. 54 101 IPR017884 -
Lele52g1095 326 Pfam Myb-like DNA-binding domain 52 96 IPR001005 -
Lele52g1095 326 CDD SANT 54 89 IPR001005 -
Lele52g1095 326 Gene3D - 54 102 - -
Lele52g1095 326 ProSiteProfiles Myb-like domain profile. 46 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1095 Lele-ChrLele52 7377341 7378523 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele52g1095 Myb_DNA-binding 1.6e-10 CL0123