Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1094 ATGCCGAATCGAGGTAGGTTTAGATTGGCCGGTCGTTCTCGGAATCGTACTGGGAGATTTCTGATCTTAGAATCAGAAATGGTTTCCCGAAGCTCCAACGTCGATTCTAATTCGAAATCAAGGGGGATTTCTTTTTCTTCTGAATTGTCGACCGAGGATGAGGCTCCATCGCCAGATTCTCCGTCGTCATCCAATAGTGCGGATTCTACGCCTGAAATTTCTCCATCTACCTCGCCTCCGTCTCGTTCTCCGCCTCCGACGAGTTCTTCACCGCCTCCATCAAGCCCTCCTCCGTCACCACTACCACCACCACCACCCTCTTCTTCGCCCCCTCCATCGTCACCGCCTCCATCACCACCGCAGTCTTCGCCACCTCCATCTCTGTCTCCTCCATCTAAACGGTCGCCACCACCATCTTCTCCTCCCTCTAAACATTCACCAGCACCATCGTCTCCTCCCCCAAAGTCATCACCGTCACCGTCACCTCCACCACAATCACAATCCCTGCCTCCACCTGATCAATCTTCTCCGCCTCAATCCGCGCCTCCAATTCCACCTTCATCTCCGCCTCTATCGCAGAACTCGTCTACACCACTGACACCGGGATCGCCAAGTAATTCGTCAGCCACCCGCAACCCATCACCACCACCTCATTCAACTACTGTTTCCCCTCCAGTTTCCGCTGCCCGACCAAGTACAACCAGCTCTGTTCCGCCACCAGGGGCGTGGGGCCCTCCTCCGACGCCGCATTCACCTTCCACAACAAGCTCAAGCGGTTCTTCGAGTGGATCCATGTCGCTCTCGTCGTCAAGACGTAGAGGCAGCGGTGGTGGTTCAGACAGTTACATTGGTTATGCTGTGGCCGCAGTGCTCGGTTTTATCCTGCTCGCCATATTGATTGTTTTCGTGGTAAAGAGGAAGAGAAAACGAAAAGTGGCCCATGCTACACATTTTGGCGCTGCCAATAACTTATATAAGAAACCAGTCGGGGAAGGATTTTACTATGCTCGGCAGCCTGGGAAAACGAATTATGCACAAGGGGGGTTTTGTACTTCCCAATCTCAAACCTCTCCCAACAATAAAATTGGGAATCAAGCAGCAGCTGTACAACATTTTGGCACTTCAGACTCGCCCTGGGGTAATGGTCAGATATCTTTTAGCTATGAGCAGATTACGGAGATAACTCGAAGATTTTCTAGTGAAAATATTTTAGGGGAGGGGGGATTTGGACATGTGTACAAGGGTTGGCTTTCAGATGGAAAAGAAGTGGCTGTGAAGCAGCTTAAGGCTGGTAGTGGCCAAGCCAGAGAAGCGAAAGTCTTAGATTGGGACAAGAGGATGAAGATTGCAATTGGCTCCGCAAAAGGCTTAGCATATTTGCATGAAGACTGCTGCCCAAAAATTATCCATAGAGATATTAAGTCAGTGAACATACTGTTGGATTATGCGTTTGAGGCACAAGCTCGTCCACTTCTCCATCGTGCTATTGAGACCCGAGACTTCAGTGAATTAGTGGACAAGAGGCTTACCTTGCAATTTGTGGAGAGCGAGATGTGCAGAATGATTGAAGCTGCTGCAGCTTGCGTTCGCCACTCTGCTCCAAAACGGCCTTGTATGATTCAGGTGTTAAGAGCATTGGATAGTCAAGATGAATCATGTGATTTATCAAATGGGGTTAAATATGGTCAGAGCACTGTTTATGATGCTGGTAACTACAGTGAAGACGCTATTATGAGATTCAGGAAGACGGCCATTGATAGCTGTAGTGAATCTGAATTTGATAGGGACAGTGGAGATTTATCTTCTCCAGTAGAGCTTTCTGGACAACAACATTCATGGCTCAAGGGTGCTTCAAGTGGCGAGTCAGAGACCCGGGCTTTCAATGCAACTAGAAGGACTTAG 1902 0.4926 MPNRGRFRLAGRSRNRTGRFLILESEMVSRSSNVDSNSKSRGISFSSELSTEDEAPSPDSPSSSNSADSTPEISPSTSPPSRSPPPTSSSPPPSSPPPSPLPPPPPSSSPPPSSPPPSPPQSSPPPSLSPPSKRSPPPSSPPSKHSPAPSSPPPKSSPSPSPPPQSQSLPPPDQSSPPQSAPPIPPSSPPLSQNSSTPLTPGSPSNSSATRNPSPPPHSTTVSPPVSAARPSTTSSVPPPGAWGPPPTPHSPSTTSSSGSSSGSMSLSSSRRRGSGGGSDSYIGYAVAAVLGFILLAILIVFVVKRKRKRKVAHATHFGAANNLYKKPVGEGFYYARQPGKTNYAQGGFCTSQSQTSPNNKIGNQAAAVQHFGTSDSPWGNGQISFSYEQITEITRRFSSENILGEGGFGHVYKGWLSDGKEVAVKQLKAGSGQAREAKVLDWDKRMKIAIGSAKGLAYLHEDCCPKIIHRDIKSVNILLDYAFEAQARPLLHRAIETRDFSELVDKRLTLQFVESEMCRMIEAAAACVRHSAPKRPCMIQVLRALDSQDESCDLSNGVKYGQSTVYDAGNYSEDAIMRFRKTAIDSCSESEFDRDSGDLSSPVELSGQQHSWLKGASSGESETRAFNATRRT 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1094 633 ProSiteProfiles Protein kinase domain profile. 267 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1094 633 Gene3D Transferase(Phosphotransferase) domain 1 383 435 - -
Lele52g1094 633 MobiDBLite consensus disorder prediction 77 192 - -
Lele52g1094 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lele52g1094 633 MobiDBLite consensus disorder prediction 193 216 - -
Lele52g1094 633 MobiDBLite consensus disorder prediction 26 76 - -
Lele52g1094 633 MobiDBLite consensus disorder prediction 238 252 - -
Lele52g1094 633 MobiDBLite consensus disorder prediction 592 633 - -
Lele52g1094 633 PRINTS Proline rich extensin signature 85 101 - -
Lele52g1094 633 PRINTS Proline rich extensin signature 102 119 - -
Lele52g1094 633 PRINTS Proline rich extensin signature 64 85 - -
Lele52g1094 633 PRINTS Proline rich extensin signature 120 145 - -
Lele52g1094 633 SMART tyrkin_6 398 546 IPR020635 GO:0004713|GO:0006468
Lele52g1094 633 Gene3D Transferase(Phosphotransferase) domain 1 436 488 - -
Lele52g1094 633 SUPERFAMILY Protein kinase-like (PK-like) 382 547 IPR011009 -
Lele52g1094 633 MobiDBLite consensus disorder prediction 1 278 - -
Lele52g1094 633 MobiDBLite consensus disorder prediction 602 626 - -
Lele52g1094 633 ProSitePatterns Protein kinases ATP-binding region signature. 404 426 IPR017441 GO:0005524
Lele52g1094 633 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 437 487 - -
Lele52g1094 633 MobiDBLite consensus disorder prediction 223 237 - -
Lele52g1094 633 MobiDBLite consensus disorder prediction 253 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1094 Lele-ChrLele52 7363357 7368078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1094 158 488 Trihelix Transcription Factor Family AT1G23540 37.321 1.38e-43 162