Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1071 ATGGGAATCATCGGTTCGATTTTCTGGCTTCTGTGTTTGTTGTTGCTTCTGGCTTTCACAGAGATTTCTTCTGCCGCTCTTTCTCCATCTGGGGTAAACTATGAAGTTGTTGCTTTGATTGCTATAAAGAATGATTTGGTTGATCCCCACAATGTTTTGGATAGTTGGGATATTAATTCTGTCGACCCTTGTAGCTGGAGGATGGTTACTTGTTCTCCAGATGGCTACGTGTCTGCTTTGGGATTGCCTAGTCAGAACTTGTCTGGTACACTGTCTCCTGGAATCCAAAACCTAACAAACTTGCAGTCTGTGTTGCTTCAGAACAATGGCATTTCTGGTTCAATTCCTGCTGGGATAGGAAATCTGGAAAAGCTTCAGACGCTTGATCTTTGCAATAATGCATTTAGTGGTGAGATACCCAGTTCTTTGGGAGGGCTAGAGAACCTGAATTATCTGAGGTTAAACAATAACAGCTTGACAGGATTCTGCCCTCAGTCCCTTGGCAACATTAAGGGACTAACTCTAGTGGACCTCTCTTATAACAATCTGAGTGGTCCGTTGCCAAGAATATCTGCAAGAACATTCAAGATTGTGGGCAACCCTTTGATTTGTGGTCCCACTGCTAATAACTGTTCAACTGTTTTGCCGGAGCCCCTTTCCTTCCCTCCAGATGCTATGAGGGCCCAATCAGACTCTCTAACAAAAAGCCAACGTGTTGCAATTGCTTTGGGTGCAAGTTTTGGTGGTGCATTTGTTGTCGTGATTATTATTGGTTTCCTTGTTTGGTGGTGGTATAGACACAACCAGCAGATATTCTTTGATGTTAATGAGCAATGTGATCCAGAGGTGCGCCTTGGCCATTTAAAAAGATACTCATTCAAAGAACTTCGAGCTGCCACAGACCATTTCAGTTCAAAGAACATTCTGGGAAGAGGTGGCTTTGGAATAGTCTACAAAGGGCGCTTGAATGATGGATCTATAGTGGCAGTGAAAAGGTTAAAGGACTACAATGCTGCTGCTGGAGAAATCCAATTTCAGACCGAAGTTGAGACAATAAGTTTGGCCGTTCACCGGAATCTTCTTAGGCTTTGTGGTTTTTGCAGTACTCAGAATGAAAGGCTCCTTGTTTATCCATACATGCCTAATGGCAGCGTAGCCTCTCGATTAAAAGATCATATTCGTGGTGAGCCGGCTTTAGATTGGGTGAGGCGAAAGAGAATAGCTTTAGGTACAGCAAGAGGGCTGGTTTATTTGCATGAGCAATGTGACCCTAAGATAATACACCGAGATGTGAAAGCCGCCAACGTATTGCTGGATGAAGACTTTGAATCAGTAGTTGGTGATTTTGGTTTGGCAAAGCTTCTGGAGCACAGAGAATCGCATGTTACCACGGCAGTGCGTGGCACGGTTGGTCACATAGCTCCAGAATACTTATGTACAGGTCAGTCATCAGACAAGACCGATGTGTTTGGATTTGGAATCTTGCTTCTTGAGCTCATCACAGGTCACAAGGCCTTGGATTTTGGAAAAGCTACTAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTCCATCAAGAACGAAGATTAACTCAAATGGTGGATAAGGATTTGAATGGAGATTTTGACTTGATTGAACTAGGAGAAATGGTTCAGGTTGCATTATTGTGTACACAGTTTAATCCTCATCAACGTCCCAAGATGTCTGAAGTACTGAAGATGCTGGAAGGGGATGGTTTAGCAGAGAGATGGGAGGTTTCACAGAAGCTTGATACATCAAAGTTGCAGTGCAGTGAAAACCCTACTCCTCAGAGATATTCAGATTTCATAGAAGACTCTTCACTCATAGTAGAAGCTATGGAGCTTTCTGGGCCTAGGTGA 1884 0.4342 MGIIGSIFWLLCLLLLLAFTEISSAALSPSGVNYEVVALIAIKNDLVDPHNVLDSWDINSVDPCSWRMVTCSPDGYVSALGLPSQNLSGTLSPGIQNLTNLQSVLLQNNGISGSIPAGIGNLEKLQTLDLCNNAFSGEIPSSLGGLENLNYLRLNNNSLTGFCPQSLGNIKGLTLVDLSYNNLSGPLPRISARTFKIVGNPLICGPTANNCSTVLPEPLSFPPDAMRAQSDSLTKSQRVAIALGASFGGAFVVVIIIGFLVWWWYRHNQQIFFDVNEQCDPEVRLGHLKRYSFKELRAATDHFSSKNILGRGGFGIVYKGRLNDGSIVAVKRLKDYNAAAGEIQFQTEVETISLAVHRNLLRLCGFCSTQNERLLVYPYMPNGSVASRLKDHIRGEPALDWVRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANVLLDEDFESVVGDFGLAKLLEHRESHVTTAVRGTVGHIAPEYLCTGQSSDKTDVFGFGILLLELITGHKALDFGKATNQKGVMLDWVKKLHQERRLTQMVDKDLNGDFDLIELGEMVQVALLCTQFNPHQRPKMSEVLKMLEGDGLAERWEVSQKLDTSKLQCSENPTPQRYSDFIEDSSLIVEAMELSGPR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1071 627 FunFam Somatic embryogenesis receptor-like kinase 1 380 596 - -
Lele52g1071 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 586 - -
Lele52g1071 627 FunFam Somatic embryogenesis receptor kinase 1 272 379 - -
Lele52g1071 627 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Lele52g1071 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Lele52g1071 627 SMART serkin_6 303 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1071 627 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Lele52g1071 627 SUPERFAMILY L domain-like 33 194 - -
Lele52g1071 627 ProSiteProfiles Protein kinase domain profile. 303 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1071 627 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Lele52g1071 627 SUPERFAMILY Protein kinase-like (PK-like) 282 577 IPR011009 -
Lele52g1071 627 Gene3D Transferase(Phosphotransferase) domain 1 380 596 - -
Lele52g1071 627 FunFam Putative LRR receptor-like serine/threonine-protein kinase 32 213 - -
Lele52g1071 627 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Lele52g1071 627 Pfam Protein kinase domain 304 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g1071 627 Gene3D Ribonuclease Inhibitor 32 213 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1071 Lele-ChrLele52 7190010 7193427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1071 68 627 Receptor kinase-like Gene Family AT1G60800 73.814 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele52g1071 Pkinase 1.5e-43 CL0016