Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1060 ATGGTTGTTGTACAGACTTATCGTATTGCATCAGAAGCCACCGTAGCGCATATATTTTCAAGATCTTTTACCGGTGATAATATCATTGACTTGTTCCATTATTTTCTTAAATCCAAAACAGAAACTTGTTCTAAACCTTCCATATTCTCGATACCTCGGTTTGGAAAGTATTTGTGGTTGCTCCAAGGTGTCTATGGAAATCTAGAAGATCTTCAGACACTTGATCTTTCCAATTATGCATTTAGTCGGGAGATACCAAGGCGCTTGAATGATGGATCTATAGTGGCAGTGAAAAGGTTGAAGGACTATAATGCTGCTGCTGGAGAAATCCAATATCAGACTGAAGTTGAGACAATGAATTTCGCCATCCACCGGAATCTTCTCAGGCTTTGTGGGTTTTGCAGTACTCAGAATGAAAAGCTCCTTGTTTATCCATACATTCCTATTGTTGTTTTGACCCGCACCATCTCAAATCAACGTCTCAAGATGTCTGAAGTATTGAAGACGTTGGAAGGAGATGGTTTAGCAGAGAGATGGGAGGTTTCACAGACGCCTTGTTACATCACAAAGTTCCAGTGCAGTGAAAAACCCTACTCCTCAGAGATGTTCAGATTTTATAGAAGACTCTTCACTCATCTTGGTTTTCCAATGTAG 654 0.4006 MVVVQTYRIASEATVAHIFSRSFTGDNIIDLFHYFLKSKTETCSKPSIFSIPRFGKYLWLLQGVYGNLEDLQTLDLSNYAFSREIPRRLNDGSIVAVKRLKDYNAAAGEIQYQTEVETMNFAIHRNLLRLCGFCSTQNEKLLVYPYIPIVVLTRTISNQRLKMSEVLKTLEGDGLAERWEVSQTPCYITKFQCSEKPYSSEMFRFYRRLFTHLGFPM 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1060 217 Pfam Protein tyrosine and serine/threonine kinase 91 167 IPR001245 GO:0004672|GO:0006468
Lele52g1060 217 Gene3D Phosphorylase Kinase; domain 1 80 146 - -
Lele52g1060 217 SUPERFAMILY Protein kinase-like (PK-like) 89 161 IPR011009 -
Lele52g1060 217 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 66 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1060 Lele-ChrLele52 7073520 7075440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1060 158 184 Receptor kinase-like Gene Family AT1G60800 70.370 4.20e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele52g1060 PK_Tyr_Ser-Thr 4.2e-06 CL0016