Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1010 ATGCGAGTTCTTCTACAACCGCTTCTTCTCCATCGAGTTCCAATCCCAATGCTTTTAGATTGTTATTCTGACTCCTTCGTTGTCTCCAACTTCTGTGCTTTTCTCTCTGTTTCTTCCTTACCGCATGGGAAACCGAAGAAGAAGAAGAAGAAAACATTAGTAAGGAAGGCTTCATCCCAGGGAACACAATATGGCTCGCGCTACAAACTGGTTGTCATTTTCGTTGTCGCCGATGGAAATGCTGAGGTCCTCCGATTCTCAGTTCGTCCAATACGACAATCTCTCTGTTGGGGGGCGAATCTGAAGTCGCAAGCAGATTACTATGGCCAAGCAGAGCAAAACCAAGGGGGGGAGAGCTTGGCGGGCCCACAAAATCAGAACGACGGAGTGCCGAAGCTGGAAGATTTTCTGGGCTACTCCGATAGCCAAACGGAGACGCAAGATTCGTCGCTGACGCATATATACGAGCAGGGAGGCGGCGGCGCCGGCTACTTTGGCGATCCGCAAGATCTGAAAGCAATCGCTGGGTTTCAAGCTTTCCTTGCTAACTCCGGCTCTGAGGTGGTGGACTCAGCGTCCATCGCAAAGACTGCTCATCATCAGGGTGCTAGTGTGGAGTTCGCGATCGAGTCGTCCGGGCACGACGTGGCGTTCTCCCGTTGCTCCACCGGTGCTTTGTCCCTCGGCGTCGCACAAAGTCGGGAGAAAGCCATTGTTGCAGTGGACTCAGATAGCCCAAAGAAAGTCGCCGATACTTTTGGTCAGCGAACTTCAATCTACAGAGGCGTTACAAGACACCGATGGACAGGAAGATATGAAGCACATCTATGGGATAACAGTTGTCGGAGAGAAGGTCAGGCGAGGAAAGGACGTCAAGGAAAGGCAATTCGGTATTTCCTTGACTATATGATTAGTTATAGTGGATATGACAAAGAAGACAAGGCTGCGAGAGCTTATGATTTGGCTGCTCTAAAGTATTGGGGTCCAACTGCGACCACCAACTTTCCTGTTTCGAATTACGCAAAGGAATTGGAAGAGATGAAACATGTCACAAAGCAAGAATTCATTGCTTCACTGAGAAGGAAAAGTAGCGGTTTCTCTAGAGGAGCTTCTATATACAGAGGCGTAACGAGGCATCATCAGCAAGGTCGATGGCAAGCGAGAATTGGTCGTGTTGCAGGAAACAAAGATCTATACCTTGGAACATTTGCTACTGAAGAGGAAGCAGCAGAGGCATATGATATTGCGGCCATTAAATTCAGAGGTGCAGGTGCGGTGACGAACTTTGAGATGAACAGATATGATGTGGAAGCTATTATGAAGGGCACTCTTCCCGTTGGTGGATCAGCCAAACGCGCAAAACATTCCCCAGAATCTGAACACAATATTGCTTTTCCTACCAATATCCAGCAACCGCAATATCCAAACGCCATTAATCCCAACGCTGAAACTATCAGTTTCACTCCCATTCAACCTGCACTCGCTGCTTCTATCCCTTGTGTCATTCCCTATGATTCTGCTGCAACACATTGCCACCCCAATTTCTTGCACCATTTTTATCCTACTAGCAGCTCTGCAACTGTGGATTCCGCCGTATCTGTGACCGCCGCTCCGATGACTGCTCTGCCGGCAGCCGCCGCTGAGTTTTTTCTGTGGCCTCATCAGCAATGTTGA 1674 0.4886 MRVLLQPLLLHRVPIPMLLDCYSDSFVVSNFCAFLSVSSLPHGKPKKKKKKTLVRKASSQGTQYGSRYKLVVIFVVADGNAEVLRFSVRPIRQSLCWGANLKSQADYYGQAEQNQGGESLAGPQNQNDGVPKLEDFLGYSDSQTETQDSSLTHIYEQGGGGAGYFGDPQDLKAIAGFQAFLANSGSEVVDSASIAKTAHHQGASVEFAIESSGHDVAFSRCSTGALSLGVAQSREKAIVAVDSDSPKKVADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGKAIRYFLDYMISYSGYDKEDKAARAYDLAALKYWGPTATTNFPVSNYAKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGAGAVTNFEMNRYDVEAIMKGTLPVGGSAKRAKHSPESEHNIAFPTNIQQPQYPNAINPNAETISFTPIQPALAASIPCVIPYDSAATHCHPNFLHHFYPTSSSATVDSAVSVTAAPMTALPAAAAEFFLWPHQQC 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1010 557 MobiDBLite consensus disorder prediction 114 136 - -
Lele52g1010 557 CDD AP2 258 338 IPR001471 GO:0003700|GO:0006355
Lele52g1010 557 SUPERFAMILY DNA-binding domain 258 338 IPR016177 GO:0003677
Lele52g1010 557 Gene3D AP2/ERF domain 372 432 IPR036955 GO:0003700|GO:0006355
Lele52g1010 557 Gene3D AP2/ERF domain 259 338 IPR036955 GO:0003700|GO:0006355
Lele52g1010 557 ProSiteProfiles AP2/ERF domain profile. 372 430 IPR001471 GO:0003700|GO:0006355
Lele52g1010 557 FunFam AP2-like ethylene-responsive transcription factor 371 432 - -
Lele52g1010 557 SMART rav1_2 372 436 IPR001471 GO:0003700|GO:0006355
Lele52g1010 557 SMART rav1_2 259 342 IPR001471 GO:0003700|GO:0006355
Lele52g1010 557 PRINTS Ethylene responsive element binding protein signature 260 271 IPR001471 GO:0003700|GO:0006355
Lele52g1010 557 PRINTS Ethylene responsive element binding protein signature 318 338 IPR001471 GO:0003700|GO:0006355
Lele52g1010 557 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 125 473 - -
Lele52g1010 557 CDD AP2 371 430 IPR001471 GO:0003700|GO:0006355
Lele52g1010 557 Pfam AP2 domain 372 422 IPR001471 GO:0003700|GO:0006355
Lele52g1010 557 ProSiteProfiles AP2/ERF domain profile. 259 336 IPR001471 GO:0003700|GO:0006355
Lele52g1010 557 SUPERFAMILY DNA-binding domain 371 431 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1010 Lele-ChrLele52 6662109 6665810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1010 130 555 AP2-EREBP Transcription Factor Family AT5G10510 54.420 8.92e-149 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele52g1010 AP2 2.5e-10 CL0081