Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0991 ATGGCGGTGCAACCTGAGGCTGAGCATCCCTGCAAGGCTTTTGGATGGGCCGCCACAGATCCCTCCGGTCTTCTTTCCCCTTTCAACTTCTCCAGAAGGGAAACAGGGGAGAAAGATGTGTCATTCAAAGTGTTGTACTGTGGAATATGCCATTCGGATCTCCACATGTTGAAGAATGAATGGGGCGTTTCCACCTATCCTCTTGTTCCTGGGCACGAGATTGTTGGGATAGTAACAGAAGTGGGAAGCAAGGTAGAGAAATTCAAAGTTGGAGACAAGGTTGGAGTAGGATGCATGGTTGGATCCTGCAAATCCTGTCAAAGCTGCTCAGACAATCTTGAGAACTATTGCCCAAAAAGTATCCTCACGTACGGTTCTAAATACTTGGATGGATCTCCCACTTATGGAGGCTATTCAAACCTGATGGTTGCAGAAGAACACTTTGTGATTCGAATCCCAGATGCTTTACCTCTTGATTCTGCAGCTCCTCTTCTTTGTGCTGGGATCACAGTGTATAGCCCTTTGAGATACTTTGGTCTTGATAAGCCAGGCCTTCATGTGGGTGTGGTTGGTCTTGGTGGACTTGGTCATTTAGCTGTCAAATTTGGTAAAGCTTTTGGGGCTAAGGTTACAGTAATCAGTACATCTCCTAACAAAAAGAAGGAAGCTATTGAACGTCTTGGAGCTGACTCATTTGTGGTCAGCACTGAACCAGTTCAGATAAAGGCTGTATTAGGCACTTTTGATGGAATCATTGATACAGTTTCTGCAAGCCATCCTCTGTTGCCTTTGCTTGGTTTGTTGAAGTCTCACGGTAAACTTATAATGCTTGGTGCACCACAGAAGCCTTTGGAGTTGCCAGCCTTCCCTTTACTCATGGGGAGGAAGACGATAGCTGGAAGTGCCATTGGAGGGATCAAGGAGACACAAGAAATGATCGATTTTGCTTCTAAACACAATGTGAAACCTGACATTGAGCTTATTTCCATGGATTATGTGAACACTGCAATGGAGCGTCTTCTCAAAGCAGATGTCAAATATCGATTTGTTATCGACATTGGCAACACCTTGAAGCCAAGCCCTTAA 1086 0.4503 MAVQPEAEHPCKAFGWAATDPSGLLSPFNFSRRETGEKDVSFKVLYCGICHSDLHMLKNEWGVSTYPLVPGHEIVGIVTEVGSKVEKFKVGDKVGVGCMVGSCKSCQSCSDNLENYCPKSILTYGSKYLDGSPTYGGYSNLMVAEEHFVIRIPDALPLDSAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHLAVKFGKAFGAKVTVISTSPNKKKEAIERLGADSFVVSTEPVQIKAVLGTFDGIIDTVSASHPLLPLLGLLKSHGKLIMLGAPQKPLELPAFPLLMGRKTIAGSAIGGIKETQEMIDFASKHNVKPDIELISMDYVNTAMERLLKADVKYRFVIDIGNTLKPSP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0991 361 PANTHER ALDEHYDE REDUCTASE 5 356 - -
Lele52g0991 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Lele52g0991 361 Gene3D - 16 353 - -
Lele52g0991 361 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Lele52g0991 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Lele52g0991 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Lele52g0991 361 CDD CAD1 14 352 - -
Lele52g0991 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Lele52g0991 361 Gene3D - 167 323 - -
Lele52g0991 361 FunFam Uncharacterized protein 16 166 - -
Lele52g0991 361 SUPERFAMILY GroES-like 19 184 IPR011032 -
Lele52g0991 361 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Lele52g0991 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0991 Lele-ChrLele52 6522329 6524605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0991 12 361 Monolignol Biosynthesis Gene Families AT4G37990 74.857 0.0 508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1017 50 6487648 6490207 Lele52g0991 52 6522329 6524605 hybridization