Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele52g0980 | ATGAAGGAATTGAATAACCAGAGCTTAAGACTTGTTATGGTTCATATCCTTTGCCTTCTTCTGTTCATCAGATCAGCTTTTGCAAGTGAAGGTTTTGTGAGCATAGCATGCTGTGCTGATTCAGATTATACAGATCCAAAGACTTCAGTAAATTACACATCAGATTTTAGTTTCTACCCAGATAAAGCAAGTTGCTTAGACACAATTAAGCCTGTGAAGAACCATGCAGGCCATGGAAAAGCAAGAGTGTTTGATATAGATAAAGGAAAAAGATGTTACAGCTTGCCAATACTTAAGAATAAAGTGTATCTGCTAAGGGGCACATTTCCATCTGATAAATCTCTAAGTGAATCTCCGAATTCCTCTTTTGATGTTACAATTAGGGTTGCCTTATTAGGTAGGGTAGAGAAACCACCTCAGGATGTGGAATTACTTGAAGGAATTTTCAGAGCTACAAAGAATTACACAGATTTCTGCTTGGTGAAGGATGAAGGAGGAAGTCCTTATGTTTCATTGATTGAACTGAGGCCGTTGGATGAAGAGTACCTACAGGATTATTCCCCTTCTAGTGTCCTAAAAGTGATCACAAGAAATAACCTAGGGGCCACCGGAGATGACATCAGGTACCCACTTGACCGAAGTGACAGAATCTGGAAAGCTACTTCAAGTTCGTCATTTTCTTCCACATCATTGAATGCAAACATTTCCAACCACAATGCTAACTCGACACCTCCTCTACAAGTCTTACGAACCGCTCTTATGCATTCTGAGCGATTGGAATTCATCCACAATGGCCTCGACCCTGGGAAATCCGAATACCGTGTGATTCTCCACTTTCTTGAATTGAACAAGAGCGTCGGAGTAGGCAAAAGGGTGTCTGATATCTACGTCAATGGTGTCATTAAAGACCCCAAGTTTGACATATTTTCTGGTGGATCGAACTACAGACAAGCTGTTTTGAACTTGTCGGCAAATGGTTCGCTGAATCTAACCTTGAGCAAGGCTTCTGGGTCTGAGAATGGACCGCTCTGTAATGCATACGAGATCCTGAAGGTTATCCCGTGGATGCAGGAAACCAACCAAACGGACTCTGAAGTGATGTTGAAGGTGAGAGAGAAATTTTTAGAGAATAACAGAGGAAATAAAGAACTGGAGAGTTGGAGTGGAGACCCTTGCATTCTGTCTCCATGGCAGCATGTAGGATGTGATCGTTTAAGTGGTCAACTTGTTATTACTAAACTGGATCTTTCTTCAAGTAATCTCCGAGGACCAATTCCTTCCAGTATCACTGAGTTGTCCAACTTAAAAATACTCAACCTGAGCTACAATAGCTTAACTGGGAATATCCCCTCATTTCTACCTTCATCTTTTCTTACATCAATAGATCTGAGCCACAATGATCTCACAGGATCGCTTCCATGGACCCTTCCCTTACTGCCAAACCTAAAGTTTTTGTACTTTGGCTGCAATAAGCGTATGAGCAAGGAGATTCCAACTTCCTTGAACAGCTTAGAAAATACAGATTATGGAAGTTGCAAACCTGGAGACCCAGGAATTTCACAAAAGCAAATCGTCATTGGGACTGTTACATGCGGATTTGTCCTGACCATTTTGGCTGCTGGAATTCTTTGTAGCTGCCATACAAGAGGAAAATTAGGGAAAACATCTGATGAAAAGGGATACCCAGCAACCACAAATTTAATTTTCTCTTTAACCAGTAAAGATGATTTCTTCGTAAAGCCAGTATCCATTCAAACATTCACCCTGGAATACATAGAGGCAGCCACACAAAACTACAAAACTTTGATTGGTGAAGGAGGCTTTGGTTCTGTTTACCGTGGCACTCTAGATGATGGCCAAGAAGTAGCAGTGAAGGTCCGTTCAGCCACATCAACTCAGGGAACTCGCGAATTCGACAACGAGGTTAACTTGCTCTCTGCTATACGGCATGAGAACTTGGTTCCTCTTATTGGTTACTGTTATGAAAAGGATCAACAAATTCTGGTGTATCCTTTTATGGCTAATGGTTCTTTACAAGATAGGCTGTATGGTTTGTCATATCTTCATACGTTTTCGGGACGTTCTGTTATACATAGAGATGTCAAATCGAGCAACATACTTCTGGATCACAGCATGTGTGCCAAGGTAGCAGACTTTGGTTTCTCAAAATATGCCCCTCTGGAAGGAGACAGTTGTGCTTCTCTTGAAGTAAGAGGAACTGCAGGATACATGGACCCTGAGTACTATACAACCCAGCAATTATCTGCAAAGAGTGATGTCTTTAGCTTTGGCATGGTTCTACTAGAAATTCTGACTGGCCGGGAACCTCTCAGCACGCGAAGACCGCGGGATGAGTGGAACTTGGTGGAATGGGCTAAACCGTACATAAGGGCGTCGAAGATCGATGAAATTGTGGACCCTAGCATCAAGGGAAGATATCATGCAGAGGCCATGTGGAGAGTAGTGGAAACAGCACTAACATGTATTGAACCATTCTCAGTGCATCGACCAATCATGGCTGATATTGTTCGTGAGTTGGAGGATGCTCTGATTATAGAAAACAATGCATCAGAATACATGAAGTCCATAGAAAGCCTTGGAGGATCAAATCGCTATTCCATTGTGATGGAGAAGAAGATGGCAGCCCCATCTCCATCTACACCAGAATCAACCGTCTTGCCCAAAACCATGTCTCGCCCGCAGCCCAGATAG | 2712 | 0.4251 | MKELNNQSLRLVMVHILCLLLFIRSAFASEGFVSIACCADSDYTDPKTSVNYTSDFSFYPDKASCLDTIKPVKNHAGHGKARVFDIDKGKRCYSLPILKNKVYLLRGTFPSDKSLSESPNSSFDVTIRVALLGRVEKPPQDVELLEGIFRATKNYTDFCLVKDEGGSPYVSLIELRPLDEEYLQDYSPSSVLKVITRNNLGATGDDIRYPLDRSDRIWKATSSSSFSSTSLNANISNHNANSTPPLQVLRTALMHSERLEFIHNGLDPGKSEYRVILHFLELNKSVGVGKRVSDIYVNGVIKDPKFDIFSGGSNYRQAVLNLSANGSLNLTLSKASGSENGPLCNAYEILKVIPWMQETNQTDSEVMLKVREKFLENNRGNKELESWSGDPCILSPWQHVGCDRLSGQLVITKLDLSSSNLRGPIPSSITELSNLKILNLSYNSLTGNIPSFLPSSFLTSIDLSHNDLTGSLPWTLPLLPNLKFLYFGCNKRMSKEIPTSLNSLENTDYGSCKPGDPGISQKQIVIGTVTCGFVLTILAAGILCSCHTRGKLGKTSDEKGYPATTNLIFSLTSKDDFFVKPVSIQTFTLEYIEAATQNYKTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNEVNLLSAIRHENLVPLIGYCYEKDQQILVYPFMANGSLQDRLYGLSYLHTFSGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPLEGDSCASLEVRGTAGYMDPEYYTTQQLSAKSDVFSFGMVLLEILTGREPLSTRRPRDEWNLVEWAKPYIRASKIDEIVDPSIKGRYHAEAMWRVVETALTCIEPFSVHRPIMADIVRELEDALIIENNASEYMKSIESLGGSNRYSIVMEKKMAAPSPSTPESTVLPKTMSRPQPR | 903 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele52g0980 | 903 | PANTHER | OS07G0107800 PROTEIN-RELATED | 33 | 853 | - | - | |
Lele52g0980 | 903 | ProSitePatterns | Protein kinases ATP-binding region signature. | 603 | 625 | IPR017441 | GO:0005524 | |
Lele52g0980 | 903 | ProSiteProfiles | Leucine-rich repeat profile. | 434 | 456 | IPR001611 | GO:0005515 | |
Lele52g0980 | 903 | MobiDBLite | consensus disorder prediction | 879 | 903 | - | - | |
Lele52g0980 | 903 | Pfam | Malectin-like domain | 40 | 352 | IPR024788 | - | |
Lele52g0980 | 903 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 696 | 708 | IPR008271 | GO:0004672|GO:0006468 | |
Lele52g0980 | 903 | Gene3D | Ribonuclease Inhibitor | 359 | 513 | IPR032675 | - | |
Lele52g0980 | 903 | Gene3D | - | 193 | 352 | - | - | |
Lele52g0980 | 903 | MobiDBLite | consensus disorder prediction | 884 | 903 | - | - | |
Lele52g0980 | 903 | SUPERFAMILY | Protein kinase-like (PK-like) | 577 | 846 | IPR011009 | - | |
Lele52g0980 | 903 | Gene3D | Phosphorylase Kinase; domain 1 | 569 | 672 | - | - | |
Lele52g0980 | 903 | ProSiteProfiles | Protein kinase domain profile. | 597 | 851 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele52g0980 | 903 | FunFam | Leucine-rich repeat receptor-like kinase | 363 | 473 | - | - | |
Lele52g0980 | 903 | Gene3D | Transferase(Phosphotransferase) domain 1 | 673 | 866 | - | - | |
Lele52g0980 | 903 | FunFam | Nodulation receptor kinase | 562 | 672 | - | - | |
Lele52g0980 | 903 | SMART | serkin_6 | 599 | 838 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele52g0980 | 903 | Pfam | Protein kinase domain | 600 | 783 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele52g0980 | 903 | Pfam | Leucine rich repeat | 412 | 468 | IPR001611 | GO:0005515 | |
Lele52g0980 | 903 | SUPERFAMILY | L domain-like | 386 | 505 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele52g0980 | Lele-ChrLele52 | 6445866 | 6451491 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele52g0980 | 9 | 853 | Receptor kinase-like Gene Family | AT1G67720 | 33.666 | 4.54e-130 | 412 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Lele52g0980 | Malectin_like | 2.4e-46 | CL0202 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele49g0944 | 49 | 5943934 | 5949527 | Lele52g0980 | 52 | 6445866 | 6451491 | hybridization | |
Lele50g1003 | 50 | 6396700 | 6402342 | Lele52g0980 | 52 | 6445866 | 6451491 | hybridization |