LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele52g0979	ATGTGGATTTTTCAACCTCGGAAGCATCAGCTAAAAGCAACCCTTCCGGCTTCCTCAAGTCGTTTTCTCACTTTGTTCCTTGCTTTTAATCCTTCATCATCCCTTGTTCCCTCAGTTTTAGGAGCCATAATCAAAACCCTCTGTTTCTATTATCAGATCATAATCATGGCTCGTCATCAACCCAATAATATTCCCCGTCGTGATTATCATCATCAACAACAACATCATCAAGAAGCTGTGATTGACATAAAGAGGCCGGTGAACTTCACCGGAGGGCTTGAGTTTTCAGGGCTGACCTACACGGTGACAAAGAAGAAGAAGGTTGATGAAAGCTGGGTGAAGGAGAACGTGGACTTGCTCCATAACATTACTGGGTATGCACCAAAGGGTTGTGTCACTGCAGTGATGGGTCCTAGTGGTGCAGGCAAGTCTACGTTCTTGGACGGTCTTGCTGGTAGAATTGCGAGTGGGAGTCTTAAGGGAAGGGTGTGTTTGGATGGCACAGATACTAACCCTACTTTGATCAAAAGAACTTCTGCTTATATCATGCAGGACGATAGGCTCTTCCCAATGCTCACTGTTTATGAAACTTTCATGTTTGCTGCTGATTTTCGACTTGGTCCACTTTCTGTTGTTGAAAAGAAGCTGAGAGTAGAGAAGCTCACTGAGCAGCTCGGATTATCATCAACTCGAAACACGTACATCGGAGACGAAGGTACAAGAGGAGTTTCTGGAGGAGAGAGACGTCGAGTGTCGATCGGCGTCGACATCATCCATGGACCATCCCTTCTATTTCTGGACGAGCCGACTTCTGGTCTGGACTCCACCAGCGCTCACAGCGTCATCGAGAAGGTCCACGACATCGCTCGCGGCGGCAGCACCGTTATCCTCACCATCCACCAGCCTTCCTCGAGAATCCTCGCCCTTCTGGACCACCTCATCATCCTCGCCAGAGGCCAGCTCATGTTTCAGGGCTCCCCCAAAGGCGTCTCTCTCCATCTGGGTCGCATGGGACGCAAAGTCCCCAAGGGAGAGAATCCAATCGAGCACCTCATTGATGTGATTCAAGAATATGATCTGTGTAATGTTGGTGTCGGAGCTCTCGCTGAGTTTGCCCGCACAGGAGTTAAACCCCCTCCTTTGCCTGACCAGGAATTCTCCCTCTCCACCGTCGCTCAGTCAACCCCAGGTCGAAACCCTCGCTTTGAGGACCGTTCTGCCGTAGACGATTTTGATCACAGTGTGAGAAGCATGAGAAGCCCTCGTACACCCCATAGTGGATTGTTTCACAAGTTAACACCTTCCCGCTTCAAGAACGAACACAGACTACAGAATAATCATTTAAGTAATTCTTCTCCGGGGTACTACACGTACTCGAGCGATATCCTGCCGACGACGCCGACGCCTTATAGCAGCGACTACACTGTGAATGAGAATGACTACCTTACTCCACCAGATGCCTTTCCGAAGCATCTGGGTCCGAAATTTGTGAACTCGTTCTTGGCGGAGACGTGGATTCTGATGCGGCGGAACTTCACAAACATCCGGCGAACTCCTGAGCTTTTTCTCTCCAGATTGACGGTGCTTACGGTGATGGGAATCATGATGGCCACCATGTTCAAGAGCCCTAAACAAGACGTGCAAGGGATCACCAACCGCCTCAGTTTCTTCATCTTCACCGTCTGTCTCTTCTTCTTCTCCTCCAACGATGCCGTGCCGGCGTTCATCCAAGAGCGATTCATTTTCATCAGGGAAACTTCTCACAACGCCTATCGAGCTTCGTCCTACACCATCGCTGGCATAATCACTCACACACCATTTCTTCTTCTGCAAGCTTCCGTCTACGCCATCATCGTCTGGTTCGCTTTGAAGCTCGAAGGCCCTTTTCTGTACTTCGTGTTGGTTCTCTTCGTTTCCCTTCTCTCCACAAACTCGTTCGTTGTTTTCGTGAGTTCAGTGGTTCCAAACTATATCCTCGGTTATGCCGCCGTCATCGCTTTCACTGCTTTGTTCTTCTTGTTCTGTGGTTACTTCTTGAGCAGCAAGGACATTCCTATTTATTGGCGTTGGATGAACAAGATTTCGACGATGACTTATCCCTATGAAGGGCTTTTGATCAACCAGTATCGGAACTCAAATGTGTTTGGATTGAACCTGGACGGGACAGATATTACAGGTTTCGATATATTGAACAGTCTTCATATAAGTACCGATTCGTTTAGGAAGTGGGAAAATGTGATTATAATGTTGTTCTGGGCCGTCCTATATAGGATTTTCTTTTACCTTGTCCTTCGTTTTGCTTCCAAAAACCAGAGGTCGTAG	2322	0.4811	MWIFQPRKHQLKATLPASSSRFLTLFLAFNPSSSLVPSVLGAIIKTLCFYYQIIIMARHQPNNIPRRDYHHQQQHHQEAVIDIKRPVNFTGGLEFSGLTYTVTKKKKVDESWVKENVDLLHNITGYAPKGCVTAVMGPSGAGKSTFLDGLAGRIASGSLKGRVCLDGTDTNPTLIKRTSAYIMQDDRLFPMLTVYETFMFAADFRLGPLSVVEKKLRVEKLTEQLGLSSTRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARGGSTVILTIHQPSSRILALLDHLIILARGQLMFQGSPKGVSLHLGRMGRKVPKGENPIEHLIDVIQEYDLCNVGVGALAEFARTGVKPPPLPDQEFSLSTVAQSTPGRNPRFEDRSAVDDFDHSVRSMRSPRTPHSGLFHKLTPSRFKNEHRLQNNHLSNSSPGYYTYSSDILPTTPTPYSSDYTVNENDYLTPPDAFPKHLGPKFVNSFLAETWILMRRNFTNIRRTPELFLSRLTVLTVMGIMMATMFKSPKQDVQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGIITHTPFLLLQASVYAIIVWFALKLEGPFLYFVLVLFVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSKDIPIYWRWMNKISTMTYPYEGLLINQYRNSNVFGLNLDGTDITGFDILNSLHISTDSFRKWENVIIMLFWAVLYRIFFYLVLRFASKNQRS	773

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele52g0979	773	Pfam	ABC-2 type transporter	300	356	IPR043926	GO:0140359
	Lele52g0979	773	PANTHER	ABC TRANSPORTER G FAMILY MEMBER 28	77	760	-	-
	Lele52g0979	773	SMART	AAA_5	129	320	IPR003593	-
	Lele52g0979	773	Gene3D	-	93	335	IPR027417	-
	Lele52g0979	773	FunFam	ABC transporter G family member 6	103	341	-	-
	Lele52g0979	773	CDD	ABCG_EPDR	93	325	-	-
	Lele52g0979	773	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	93	343	IPR003439	GO:0005524
	Lele52g0979	773	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	115	331	IPR027417	-
	Lele52g0979	773	Pfam	ABC-2 type transporter	504	709	IPR013525	GO:0016020\|GO:0140359
	Lele52g0979	773	ProSitePatterns	ABC transporters family signature.	243	257	IPR017871	GO:0005524\|GO:0016887
	Lele52g0979	773	Pfam	ABC transporter	120	271	IPR003439	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele52g0979	Lele-ChrLele52	6439250	6442475	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele52g0979	80	437	Calmodulin-binding Proteins	AT2G36910	26.016	4.68e-12	68.2