Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele52g0943 | ATGGATTATGGTCGAGACGGGAACGTCGTTCAGATAATCACTAGTGGTGGAAATGAAAACTGGTCCGGTGACCAGGCCGTTTGGGCGACGGAAGACGATTATCGATTCTGGAACAACGGCGACGCTGACACTCCCACGGACTCGAATTACGATCAGAGGCAGTCCCAATCACGATCTGGGAGTGAACCCCCAAATAAGAAATCTAGAAATTCTCAGGACGTGACTTCATCGAATCGCTCCAAAGCTATAGGGAAAATGTTCTTCAAGACAAAACTATGTTGCAAATTCCGGGCCGGTACGTGTCCTTATATCACGAACTGCAATTTCGCTCACAGTGTTGAAGAGCTTCGTCGGCCACCTCCGAATTGGCAAGAAATTGTGGCTGCTCATGAAGAGGAAAAATCCATAATGTCGGAACCGAGGGAGGAGTTTCAAATTCCGTCCATTGTGTCGTCCGGGTTTGCTGGGGAGATGCAGAGAGCGTTTAAAGGTCGCCATTGCAAGAAGTTTTACACGGAAGAAGGATGCCCATATGGAGATAATTGTACATTTCTTCATGACGAGCAATCTAGGAATCGTGAGAGTGTGGCTATAAGTTTAGGCCCCGGTGGGTATGGTGGTGCTGGGAGTGGCTCTAATTCCAAGCCATCAAATTGGAAAACACGGATTTGCAATAAGTGGGAGATGACTGGGTATTGCCCATTTGGAAATAAATGTCATTTTGCTCATGGCGCTGCAGAGTTGCACCGATATGGAGGGGGGCCTATGGAGGGAGAAAATAGAGAAACTGCATCTGCTACTGCTCCAGACACGAAGCAGGGTGGGGTGCCTTCAAAAACGCCCGCTGATAATGTCGTTTCATCAGTCACTCCTGTTGCTCATCCTGATGTGTATCACATCGGAGTTCCTTCACAAAGGTCTTCCATTGTGATTCAGAGGCCAGGTCAGAGAGCTCATCAGAAGTGGAAGGGTCCAGATAAAATCAGTAGGATATATGGTGATTGGATTGATGACTTGGAATGA | 1023 | 0.4761 | MDYGRDGNVVQIITSGGNENWSGDQAVWATEDDYRFWNNGDADTPTDSNYDQRQSQSRSGSEPPNKKSRNSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSVEELRRPPPNWQEIVAAHEEEKSIMSEPREEFQIPSIVSSGFAGEMQRAFKGRHCKKFYTEEGCPYGDNCTFLHDEQSRNRESVAISLGPGGYGGAGSGSNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGAAELHRYGGGPMEGENRETASATAPDTKQGGVPSKTPADNVVSSVTPVAHPDVYHIGVPSQRSSIVIQRPGQRAHQKWKGPDKISRIYGDWIDDLE | 340 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele52g0943 | 340 | MobiDBLite | consensus disorder prediction | 264 | 282 | - | - | |
Lele52g0943 | 340 | FunFam | zinc finger CCCH domain-containing protein 15-like | 212 | 251 | - | - | |
Lele52g0943 | 340 | FunFam | Zinc finger, CCCH-type | 155 | 193 | - | - | |
Lele52g0943 | 340 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 88 | 112 | IPR000571 | GO:0046872 | |
Lele52g0943 | 340 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 219 | 244 | IPR000571 | GO:0046872 | |
Lele52g0943 | 340 | FunFam | Zinc finger CCCH domain-containing protein | 83 | 119 | - | - | |
Lele52g0943 | 340 | ProSiteProfiles | Zinc finger C3H1-type profile. | 87 | 114 | IPR000571 | GO:0046872 | |
Lele52g0943 | 340 | SMART | c3hfinal6 | 87 | 113 | IPR000571 | GO:0046872 | |
Lele52g0943 | 340 | SMART | c3hfinal6 | 161 | 188 | IPR000571 | GO:0046872 | |
Lele52g0943 | 340 | SMART | c3hfinal6 | 218 | 245 | IPR000571 | GO:0046872 | |
Lele52g0943 | 340 | SUPERFAMILY | CCCH zinc finger | 85 | 118 | IPR036855 | GO:0046872 | |
Lele52g0943 | 340 | SUPERFAMILY | CCCH zinc finger | 216 | 249 | IPR036855 | GO:0046872 | |
Lele52g0943 | 340 | ProSiteProfiles | Zinc finger C3H1-type profile. | 218 | 246 | IPR000571 | GO:0046872 | |
Lele52g0943 | 340 | Gene3D | - | 155 | 201 | - | - | |
Lele52g0943 | 340 | MobiDBLite | consensus disorder prediction | 36 | 78 | - | - | |
Lele52g0943 | 340 | SUPERFAMILY | CCCH zinc finger | 161 | 189 | IPR036855 | GO:0046872 | |
Lele52g0943 | 340 | Gene3D | - | 211 | 250 | - | - | |
Lele52g0943 | 340 | Gene3D | - | 82 | 118 | - | - | |
Lele52g0943 | 340 | MobiDBLite | consensus disorder prediction | 41 | 78 | - | - | |
Lele52g0943 | 340 | MobiDBLite | consensus disorder prediction | 198 | 219 | - | - | |
Lele52g0943 | 340 | MobiDBLite | consensus disorder prediction | 252 | 282 | - | - | |
Lele52g0943 | 340 | Pfam | CCCH-type zinc finger | 165 | 187 | IPR041367 | - | |
Lele52g0943 | 340 | PANTHER | CCCH ZINC FINGER/TIS11-RELATED | 208 | 269 | IPR045877 | GO:0003729 | |
Lele52g0943 | 340 | ProSiteProfiles | Zinc finger C3H1-type profile. | 161 | 189 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele52g0943 | Lele-ChrLele52 | 6145138 | 6148507 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele52g0943 | 220 | 248 | C3H Transcription Factor Family | AT1G68200 | 62.069 | 2.66e-07 | 49.7 |