Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0922 ATGCCTTTTCAACCTTTCCAACCTCCCTTGAAAGAAGAAGGGATGATGATGAGAGGGAAGGAAGAAATCATGGAGAGTGGTTCTGGTAGCGAACAAGCCGAACAAGACAACAAGTCAGGGAACGAGCAAGACAGTGAACAGCCAGCCAACAAGAAGAAACGTTACCACAGGCACACTGCTCGTCAGATCCAAGAAATGGAAGCTTTGTTTAAGGAATGTCCTCACCCAGACGACAAACAAAGGATGAAACTCAGCCAAGAGCTGGGCTTGAAGCCCCGCCAAGTCAAGTTCTGGTTTCAAAATCGTCGAACTCAGATGAAGGCTCAACAAGATAGAGCTGATAATGTGATACTGAGAGCAGAAAATGAGAACCTCAAGAATGAGAACTATCGTCTACAAGCAGCTCTGCGTAATGTGATGTGTCCCAATTGTGGTGGTCCGGCGGCCATGATGGGTGCTAATCTTGGCATGGATGACCATCAGCTTCGACTTGAAAACGTTCGCCTCAGAGAAGAGTTAGAACGCGTGTGTTGTCTGACATCAAGATACACAGGCCGTGCAATGCAAACAATGGCGTCGCTAGCTCCTCCTCTGTTGACTCCTTCATTGGATTTGGACATGAACATATACCCAAGGCACTTTTCTGATCCCGTCGTCTCTTGTACTTCCGAGATGATTCCTGTTCCAATGTTGCCGCAGCCTCCTTCCGATACTTCGCCGTTCCCGGACGGGGGCCTGTTGTTGATGGAAGAGGACAAGTCTCTGGCATTGGAGCTCGCCGTGTCGTCCATGGATGAACTCGTGAAGATGTGTCAGGCAAACGAGCCGCTTTGGATGACAAACAGTGAGAATAGTGAGAGGGAAATGCTGAATTTTGAGGAGCATGCTAAGCTTTTTCATTGGCCTCTCAACCTCAAGAACCATTCTACTGAACTGAGGAGAGAAGCTAGCCGCGACACTGCTGTCGTTATAATGAATAGCGTTACTCTTGTTGACGCCTTCCTTGATGCTATGAAGTGGATGGAATTGTTCCCCACCATTGTTTCTAGGGCAAAAACTGTACAAATTATATCTTCTGGTGCTTCTGGTCATGCGAGTGGGTCTCTTCAACTGATGTACGCAGAAGTGCAAGTGATTTCTCCATTGGTGCCTACTCGTGATACTCATTTTCTTCGCTACTGCCAACAAAACGCCGAGGAGGGAACGTGGGCCATTGTTGATTTTCCTCTTGACAGCTTCCATGAAAATTTTCACCATTCTTATCCCAGATACTGCAGGCGACCCTCTGGCTGTATTATTCAAGACATGCCAAATGGCTACTCAAGGGTAACTTGGGTGGAGCATGCAGAGGTGGAAGAGAAACCAGTGCATCAGATATTCAGTAACTATGTATACAGTGGAATGGCGTTTGGAGCACAACGTTGGTTAGGGGTTTTGCAGAGACAATGTGAGAGGGTCGCCAGCCTTATGGCAAGGAATATCTCAGACCTTGGAGTGATACCTTCACCAGAAGCGAGAAAGAACTTGATGAAACTGGCGCAAAGAATGATAAGAACGTTTAGCCTGAACATGAGTACGTCGAGTGGACAATCATGGACGGCGTTATCAGATTCTGCACAAGACACTGTTAGAATTACAACGAGGAAGATTACAAATCCAGGGCAACCTAATGGGGTCATACTCAGTGCAGTATCCACCACTTGGCTTCCTTATTCTCACTCCAAGGTCTTTGACCTCCTCAAGGACGAACGTCGCAGATCTCAGTTGGATTTTCTCTCCAATGGGAACTCTTTGCATGAAGTGGCTCATATTGCAAATGGTTCACATCCAGGAAATTGCATCTCCCTTTTGCGCATAAACGTGGCGAGCAACTCATCTCAGAACGTAGAGCTAGTGGTGCAAGAGAGCTGCACCGATCAGTCGGGGAGTTTAGTGGCGTACGCCACCATCGACGTGGAATCCATCCAGCTCGCCATGTCTGGCGAGGACCCTTCCTCCATAGCACTACTTCCCCAAGGATTCGTCATCGTTCCTGCAACAATCTCCGCCGCACCCACCAATGCCAATTCAACTGAATCCCCCGCCAACGCCGGAGCACCACCTCCTTCGACTCTGAACCAAGCTTGTCTTCTCACAGTGGGCCTTCAAGTCCTGGCCAGCGCCATCCCTTCAGCGAAACTGAACCTCTCCAGCGTCACCGCCATTAACAACCATCTCTGCAACACTCTCCACCAGATCGAAGCCGCTCTTTGCACTGACAATGCCACTTTTGTCACTGAACCCGCCGCCGCCACTGCTACCACCCCTAAGCAATAG 2316 0.4888 MPFQPFQPPLKEEGMMMRGKEEIMESGSGSEQAEQDNKSGNEQDSEQPANKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENENLKNENYRLQAALRNVMCPNCGGPAAMMGANLGMDDHQLRLENVRLREELERVCCLTSRYTGRAMQTMASLAPPLLTPSLDLDMNIYPRHFSDPVVSCTSEMIPVPMLPQPPSDTSPFPDGGLLLMEEDKSLALELAVSSMDELVKMCQANEPLWMTNSENSEREMLNFEEHAKLFHWPLNLKNHSTELRREASRDTAVVIMNSVTLVDAFLDAMKWMELFPTIVSRAKTVQIISSGASGHASGSLQLMYAEVQVISPLVPTRDTHFLRYCQQNAEEGTWAIVDFPLDSFHENFHHSYPRYCRRPSGCIIQDMPNGYSRVTWVEHAEVEEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTALSDSAQDTVRITTRKITNPGQPNGVILSAVSTTWLPYSHSKVFDLLKDERRRSQLDFLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELVVQESCTDQSGSLVAYATIDVESIQLAMSGEDPSSIALLPQGFVIVPATISAAPTNANSTESPANAGAPPPSTLNQACLLTVGLQVLASAIPSAKLNLSSVTAINNHLCNTLHQIEAALCTDNATFVTEPAAATATTPKQ 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0922 771 Pfam START domain 259 485 IPR002913 GO:0008289
Lele52g0922 771 ProSiteProfiles START domain profile. 249 488 IPR002913 GO:0008289
Lele52g0922 771 SUPERFAMILY Bet v1-like 250 487 - -
Lele52g0922 771 ProSitePatterns 'Homeobox' domain signature. 84 107 IPR017970 GO:0000981|GO:0006355
Lele52g0922 771 SMART START_1 258 485 IPR002913 GO:0008289
Lele52g0922 771 MobiDBLite consensus disorder prediction 1 59 - -
Lele52g0922 771 SUPERFAMILY Homeodomain-like 38 110 IPR009057 -
Lele52g0922 771 MobiDBLite consensus disorder prediction 37 51 - -
Lele52g0922 771 Gene3D - 36 120 - -
Lele52g0922 771 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 50 750 IPR042160 -
Lele52g0922 771 CDD homeodomain 52 110 IPR001356 GO:0003677
Lele52g0922 771 Coils Coil 108 138 - -
Lele52g0922 771 Gene3D - 264 474 IPR023393 -
Lele52g0922 771 SMART HOX_1 50 113 IPR001356 GO:0003677
Lele52g0922 771 SUPERFAMILY Bet v1-like 521 747 - -
Lele52g0922 771 CDD START_ArGLABRA2_like 253 484 - -
Lele52g0922 771 Pfam Homeodomain 52 107 IPR001356 GO:0003677
Lele52g0922 771 FunFam Homeobox-leucine zipper protein HDG1 39 125 - -
Lele52g0922 771 ProSiteProfiles 'Homeobox' domain profile. 49 109 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0922 Lele-ChrLele52 6000829 6005472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0922 16 750 Homeobox Transcription Factor Family AT5G46880 60.417 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele52g0922 START 3.9e-44 CL0209