Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0920 ATGGAGCTATTCCCAGCACAGCCAGATTTGTCTCTGCAAATCAGCCCTCCAAACAGCAAACCAAGTTCCAATTGGAGGAGAGATAATAATAATGGTGGTGACGTGGATTTGGGGTTCTGGAAGAGAGCTTTGGACTCCTCTAACTCTTCAATGCCCAAATCCAAACCTTCTTCTGATAATCTTATTCATCACCATAACTCCACCTTCGACCTCTCTCTCTCCTCCTCCAATCTTACATCCACCGCACCTCCTTCATCTTCTTCACTCTACAGCAACAACTCTAACCTCATCAACCACCACCACTGTCATTTACTCCGAAACGGCAACAATAATGCCAATCCCTTGCCGTCCCCGTCATCATCGTTTCCCTACTCCCACCACCACCGCCACAGTCTCAGCTTTCTCAGACCTATCAGAGGAATCCCTCTCTACCAAAACCTTCCTCCTCCTTCAGCTTCTTCTAACATCCCATTCGGTGCTCTAGTTGATGCTCATACTTATTCCCCTGTTACTCCTCCTCCTCCTCCTTCATCTCTATCTAACATTAACAATATGACCTCTTCCACAAGATCTTCGTCGAGCCCCTTTCGGTCTCACCAAGTTTTGATGAGGTCTAGGTTGTTGTCTCGTTTCCCTGCTAAGCGCAGCATGAGAGCTCCTCGCATGCGTTGGACTACCACCCTCCATGCTCGCTTTGTTCATGCCGTTGAGCTTCTCGGTGGCCATGAAAGTATGCTTCTTCTTAGCTTTCTCTCTTCTTTTCCAAATTTCTTCATCATCCCCAGCAACAGGGCAACACCAAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCTCATGTTAAATCTCATCTACAGATGTACCGAACGGTGAAAACCACAGATAAAGCGGCCGCTTCCTCAGGGCAATCTGATGTATATGATAATGGATCATCTGGAGATAATTCTGAAGATTTCATGTTTGACATGAACAATTCATCCAGAAGGTCTGATCTATCTTCTACCAAGCAAGCAAAAGAAGGTGCTAATCGTGGGTTTTGGAGAAACTCTTCCAGGGAAGCTTGGTTGCATGGGAGACCAAAGCTGGATTATTGTGCAGGAAACTTGAGTTCTTTTGAGAAGGAAATGGATCAAACAAAATGCCTAAGTTACGAGAGAGTATCAGATGGAAGTGCATCGTCAGATCTTTCAGGAACAAGCCCCAAGAAACCAAATTTGGATTTGGAGTTTAGCTTAGGGCAGCCACGTTGA 1260 0.4548 MELFPAQPDLSLQISPPNSKPSSNWRRDNNNGGDVDLGFWKRALDSSNSSMPKSKPSSDNLIHHHNSTFDLSLSSSNLTSTAPPSSSSLYSNNSNLINHHHCHLLRNGNNNANPLPSPSSSFPYSHHHRHSLSFLRPIRGIPLYQNLPPPSASSNIPFGALVDAHTYSPVTPPPPPSSLSNINNMTSSTRSSSSPFRSHQVLMRSRLLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHESMLLLSFLSSFPNFFIIPSNRATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSGQSDVYDNGSSGDNSEDFMFDMNNSSRRSDLSSTKQAKEGANRGFWRNSSREAWLHGRPKLDYCAGNLSSFEKEMDQTKCLSYERVSDGSASSDLSGTSPKKPNLDLEFSLGQPR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0920 419 MobiDBLite consensus disorder prediction 388 419 - -
Lele52g0920 419 Gene3D - 219 296 - -
Lele52g0920 419 SUPERFAMILY Homeodomain-like 217 293 IPR009057 -
Lele52g0920 419 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 263 293 IPR006447 GO:0003677
Lele52g0920 419 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 418 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lele52g0920 419 MobiDBLite consensus disorder prediction 320 347 - -
Lele52g0920 419 MobiDBLite consensus disorder prediction 1 38 - -
Lele52g0920 419 MobiDBLite consensus disorder prediction 11 30 - -
Lele52g0920 419 MobiDBLite consensus disorder prediction 388 404 - -
Lele52g0920 419 MobiDBLite consensus disorder prediction 320 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0920 Lele-ChrLele52 5965485 5970052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0920 1 418 G2-like Transcription Factor Family AT4G17695 36.557 4.83e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele52g0920 None None None