Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0913 ATGATCGGAAGGGAAACCGGAGAGAAAGATGTGAGATTCAAAGTTATGTATTGTGGAATATGCCACACGGACGTCAACATGCTCAAGAACGATTGGGGCATTTCCGTCTATCCCCTTGTACCTGGGCATGAGATTGCTGGCGTAGTGACAGAGGTGGGAAGCAAGGTAGAAAAGTTCAAAGTTGGCGACAGGATTGGTGTGGGATACTTGGTTGGCTCCTGCCGTTCATGTCAAAGCTGTTCCGACGACCTTGAGAATCAGTGCTCAAAACAAATTCTTACTTCTGGTGCTAAGTATGTAGATGGAACTATGACACATGGAGGCTACTCAGATTTTATGGTTGCCGACGAGCACTTTGTGGTTCACATTCCTGATTCTATGCCTCTTGATGCTGCAGCTCCTCTGCTTTGTGCTGGAATCTCAGTGTATAGCCCTTTGAGGTACTTTGGTCTGGACAAGCCAGGCCTTCATGTGGGTGTGGTTGGTCTTGGTGGCCTTGGCCATATGGCTGTCAAGTTTGCTAAAGCCTTTGGAGCTAAGGTCACTGTCATCAGTACTTCTCCTAACAAAAAGAAGGAAGCCATTGAACATCTTGGAGCTGACTCCTTTGTTGTCAGCCGCGAGCAAGATCAGATGCAGGCTGCAAGGGGGACTTTTGATGGGATCATTGACACAGTTTCTGCACAGCATCCTCTGGTACCTTTGATTGATCTGTTGAAGTCTAATGGAAAAATTGTACTGGTGGGTGCACCTGAAAAGCCTCTAGAGTTGGCAGTGTTTCCTTTACTTGCGGGGAGAAAGATGGTAGCTGGGAGTTATGTCGGAGGGTTGAAGGAAACACAAGAAATGATGGATTTTGCTGCTAAGCACAATGTGAAACCTGACATAGAAGTAATTCCAGTGGATTACGTGAATACCGCAATGGAACGTCTCCTTAATGCTGATGTCAAATATCGTTTTGTGATTGACATTGCCAACACCTTGAAGCCAACAACCTCATAG 1002 0.4621 MIGRETGEKDVRFKVMYCGICHTDVNMLKNDWGISVYPLVPGHEIAGVVTEVGSKVEKFKVGDRIGVGYLVGSCRSCQSCSDDLENQCSKQILTSGAKYVDGTMTHGGYSDFMVADEHFVVHIPDSMPLDAAAPLLCAGISVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFVVSREQDQMQAARGTFDGIIDTVSAQHPLVPLIDLLKSNGKIVLVGAPEKPLELAVFPLLAGRKMVAGSYVGGLKETQEMMDFAAKHNVKPDIEVIPVDYVNTAMERLLNADVKYRFVIDIANTLKPTTS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0913 333 FunFam Uncharacterized protein 1 137 - -
Lele52g0913 333 SMART PKS_ER_names_mod 3 322 IPR020843 GO:0016491
Lele52g0913 333 Pfam Zinc-binding dehydrogenase 165 288 IPR013149 -
Lele52g0913 333 SUPERFAMILY GroES-like 5 155 IPR011032 -
Lele52g0913 333 Pfam Alcohol dehydrogenase GroES-like domain 9 122 IPR013154 -
Lele52g0913 333 Gene3D - 138 294 - -
Lele52g0913 333 Gene3D - 4 324 - -
Lele52g0913 333 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 42 56 IPR002328 GO:0008270|GO:0016491
Lele52g0913 333 CDD CAD1 4 323 - -
Lele52g0913 333 FunFam Putative cinnamyl alcohol dehydrogenase 6 295 324 - -
Lele52g0913 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 127 293 IPR036291 -
Lele52g0913 333 FunFam Cinnamyl alcohol dehydrogenase 138 294 - -
Lele52g0913 333 PANTHER ALDEHYDE REDUCTASE 4 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0913 Lele-ChrLele52 5900208 5904868 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0913 4 331 Monolignol Biosynthesis Gene Families AT4G37990 69.207 4.71e-157 442