Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0911 ATGCAGAACTCACCCGAAGACGACCGTGGGGATTCAACGATGGTGAATTCGGGGAGATTTAGCCACGATGTATCAACCAGAAGGAGTGTTGAAATGGCCGTAGAACAATCTGAGTTTGAGCATCCAAGGAAGGCCTTCGGCTGGGCTGCTAGGGATTCTTCTGGCATTCTCTCCCCTTTCAACTTCTCTCGGAGGGAAACCGGAGAGAAAGACGTGGCATTCAAAGTGCTTTATTGTGGAATCTGCCACTCTGACCTCCACATGCTCAAGAACGAATGGGGCTTCTCCCTCTATCCACTTGTACCTGGGCACGAGCTTGTTGGGGTGGTGACAGAAGTGGGAAGCAAGGTGGAAAAGTTCAAAGTTGGAGACAAGGTCGGTGTGGGATGCTTGGTTGGGTCGTGCCGATCCTGTCAAAGCTGTTCAGGCGACCTTGAGAATTATTGCTCAAAGCAGATTCTCACGTATGGGGCCAAGTACATGGACGGCACCGTCACATACGGTGGCTACTCCGACTTTATGGTTGCCGACGAGCATTTTGTGGTTCGCATTCCAGATGCTATGCCTCTGGATGCTGCAGCTCCTCTGCTTTGTGCAGGAATCACAGTGTATAGCCCTTTGAGATACTTTGGTCTGGACAAGCCAGGCCTTCATGTGGGCGTGGTTGGTCTCGGCGGGCTTGGCCATTTGGCTGTCAAGTTTGCGAAAGCCTTTGGGGCTAAGGTCACTGTCATCAGCACTTCTCCTAACAAGAAGAAGGAAGCCATTCAACAACTTGGAGCTGACTCCTTTGTTGTCAGCCGTGAGCATGATCAGATGCAGGCTGTGATGGGCACGTTTGATGGCATAATAGACACAGTTTCAGCAGTGCATGCTCTCTTGCCTCTGATTGGTCTATTGAAGACCAACGGCAAGCTTGTGTTGGTTGGTGCGCCGGAGAAGCCTCTGGAACTGCCAGTATTTCCTTTACTTTTGGGGAGGAAGATAGTGGCTGGAAGTGGGATTGGAGGGATGAAGGAGACGCAAGAGATGGTAGATTTTGCTGCAAAGCATAACGTAAGACCAGACATTGAAGTAATTCCAATGGATTACGTTAATACTGCAATGGAACGTCTTCTTAAAGCTGATGTCAAGTATCGTTTTGTCATTGACATTGCCAACACATTGAAGCCACCAACCTCTTATTATTAG 1191 0.4937 MQNSPEDDRGDSTMVNSGRFSHDVSTRRSVEMAVEQSEFEHPRKAFGWAARDSSGILSPFNFSRRETGEKDVAFKVLYCGICHSDLHMLKNEWGFSLYPLVPGHELVGVVTEVGSKVEKFKVGDKVGVGCLVGSCRSCQSCSGDLENYCSKQILTYGAKYMDGTVTYGGYSDFMVADEHFVVRIPDAMPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHLAVKFAKAFGAKVTVISTSPNKKKEAIQQLGADSFVVSREHDQMQAVMGTFDGIIDTVSAVHALLPLIGLLKTNGKLVLVGAPEKPLELPVFPLLLGRKIVAGSGIGGMKETQEMVDFAAKHNVRPDIEVIPMDYVNTAMERLLKADVKYRFVIDIANTLKPPTSYY 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0911 396 FunFam Putative cinnamyl alcohol dehydrogenase 6 356 385 - -
Lele52g0911 396 SUPERFAMILY GroES-like 52 216 IPR011032 -
Lele52g0911 396 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 188 353 IPR036291 -
Lele52g0911 396 PANTHER ALDEHYDE REDUCTASE 38 388 - -
Lele52g0911 396 Gene3D - 48 385 - -
Lele52g0911 396 SMART PKS_ER_names_mod 55 383 IPR020843 GO:0016491
Lele52g0911 396 CDD CAD1 46 384 - -
Lele52g0911 396 Pfam Zinc-binding dehydrogenase 226 349 IPR013149 -
Lele52g0911 396 Pfam Alcohol dehydrogenase GroES-like domain 70 183 IPR013154 -
Lele52g0911 396 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 103 117 IPR002328 GO:0008270|GO:0016491
Lele52g0911 396 FunFam Cinnamyl alcohol dehydrogenase 199 355 - -
Lele52g0911 396 MobiDBLite consensus disorder prediction 1 21 - -
Lele52g0911 396 FunFam Uncharacterized protein 48 198 - -
Lele52g0911 396 Gene3D - 199 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0911 Lele-ChrLele52 5885710 5889464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0911 43 391 Monolignol Biosynthesis Gene Families AT4G37990 73.926 2.84e-180 503