Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0898 ATGGCGGAGAGTCCAGTATCGTTTTTGCTGGACAAGCTGACTTCAATGCTTCAAGAACAAGTGCAGCTGCTGAGAGGGGTTCACACAGAGGTTCAGTTCATCAAAGATGAAGTGGAGCACCTCAAAGCCATCTTAAGGGTGGTTGATTCTGTGGAGGACAAAGACCCAGAACTGAAAGTTTGGGTGAAGCAAGTCAGAGATGTGGCTTATGACATGGAAGACGCCATTGATGAGTTCACTATTCGCCTCGTGAATCATCGTGGCCATGGCCACAATTCTTGTCTCAGCAGGTTTGCTTCAGCCATTCAAGCGCTCAGAGCTCGGCATTGGATCGCTTCAGCGATACAACAGATCAAATGTAGAGTGGAAAACATCTCAACGGGTCGTCCCAAAATGATTGACACTGGCTCAAGCTTCAGTAATGGGTATACATCTAGGCTACATCGCCAAGGAGACGCGCTTCTGCACGACGAAGCTGACCTTGTGGGTGTTGAGAAGCCAAAGAAACAGCTAATTGATTTGCTTTTGCAGGAGGAACAAGGAAAAGTGGTGATTCCAATCTATGGAATGGGAGGATCGGGGAAAACCACAGTGGCAAAGCAAGTCTATGATGATCCAAAAGTGAAGAAGCGTTTTAAGATGCATGCTTGGGTCACAGTTTCTCAATCCTTCAAGATCAAAGAGCTTCTGAGAGACATGGTTCAACAGCTTTATAAAGTTATTGGAAAACCAGCTCCTGCAGAAATTGGCACAATGAAAGTTGACAGTCTGAAGGAGATGGTCAAGAGTCTGCTTCAACAAAGTAGGTACCTCATCGTACTAGATGACATATGGAGGGTAAATTCATGGGATTCTATCAAACTTGCTTTGCCTAACAACAATTATGGTAGTAGAATAATGGTCACCACAAGGAACAAAGATGTAGCACTTTCTTGTCGTACTGAGTTGCAAGGTAAGATCTATAACCTGGAATTCTTACCTCACAATGAAGCATGGTCTCTTTTCTGTAAGAAAACGTTTCAGGGGAATTCATGTCCTCCTCATTTAGAGGAGCCATGTAAGAGTATATTGAGAAGATGTGGGGGGTTGCCTTTGGCAATCGTGGCAATTAGCGGTGCTTTGGCTACAAAAGACAGAACCAACATGGAAGAGTGGTCTGTTGTTAGTAGAAGTTTTGCATCTGAAATTGAAGGCAATGACAAAATGGAGGATATGAACAAAGTGCTTTCTCTAAGTTTCAATGACTTGCCTTACTATCTTAAATCCTGCCTGTTGTACCTGATCATCTTCCCAGAATTTTACGCCATCGAGCATATGAGGTTGATTCGGTTGTGGATAGCTGAAGGGTTTGTCAATGGAGAAGAAGGAAGGACACTAGAAGAAGTTGCAGAGAGGTACCTGAAGGAGCTCTTGAACAGAAGTCTGATTCAAGTGGTGGAGAAAGGCACCGATGGCAGGATGAAGACTTGTCGTGTTCATGACTTTCTTCGGGACATCATTAATTTGAAGTCAAGAGATCAGAACTTTGCAACAATAGCTAGAGACCAGGACATAATCTGGCCAGAAAGAGTTCGTCGCTTATCAGTAATGAATAGCTTACAGAGCATACAGCAAAATAGGACCCCATTCCAATTGCGTTCTCTGCTGTTGTTTTCTTTAGCAGATTCACATGATCATATCTCCATATCTGCATTATTCTCACATGGTTGTAGGCTTCTCAAGGTGCTAGATCTGCAAGATGCACCTTTGGAATCATTTCCTACTGAAATTGTCAACCTTTACCACCTCAAGTATCTAAGCCTGAAGAATACCAAGGTAAAAAGCATTCCAGGATCCATTAAGAAGCTTCAAAACCTGGAAACATTAGATCTCAAACACTCCAATGTCACTGAATTGCCAGTTGAAATCTTGGAGCTGCATCGACTACGCCATCTCCTGGTGTATTTTTACGAGATCGAATCCTATGCTCATATCCACTCAAGACATGGTTTCAAGCTACCTGGTCCAATAGGATGCATGCAAAAATCTGCAAAAGCTTTGTTTCATAGAAGCAGACCAAGGAAGTCAAGAATTGATGGTTGA 2082 0.4304 MAESPVSFLLDKLTSMLQEQVQLLRGVHTEVQFIKDEVEHLKAILRVVDSVEDKDPELKVWVKQVRDVAYDMEDAIDEFTIRLVNHRGHGHNSCLSRFASAIQALRARHWIASAIQQIKCRVENISTGRPKMIDTGSSFSNGYTSRLHRQGDALLHDEADLVGVEKPKKQLIDLLLQEEQGKVVIPIYGMGGSGKTTVAKQVYDDPKVKKRFKMHAWVTVSQSFKIKELLRDMVQQLYKVIGKPAPAEIGTMKVDSLKEMVKSLLQQSRYLIVLDDIWRVNSWDSIKLALPNNNYGSRIMVTTRNKDVALSCRTELQGKIYNLEFLPHNEAWSLFCKKTFQGNSCPPHLEEPCKSILRRCGGLPLAIVAISGALATKDRTNMEEWSVVSRSFASEIEGNDKMEDMNKVLSLSFNDLPYYLKSCLLYLIIFPEFYAIEHMRLIRLWIAEGFVNGEEGRTLEEVAERYLKELLNRSLIQVVEKGTDGRMKTCRVHDFLRDIINLKSRDQNFATIARDQDIIWPERVRRLSVMNSLQSIQQNRTPFQLRSLLLFSLADSHDHISISALFSHGCRLLKVLDLQDAPLESFPTEIVNLYHLKYLSLKNTKVKSIPGSIKKLQNLETLDLKHSNVTELPVEILELHRLRHLLVYFYEIESYAHIHSRHGFKLPGPIGCMQKSAKALFHRSRPRKSRIDG 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0898 693 Pfam Rx N-terminal domain 6 92 IPR041118 -
Lele52g0898 693 Pfam NB-ARC domain 165 414 IPR002182 GO:0043531
Lele52g0898 693 CDD RX-CC_like 2 126 IPR038005 -
Lele52g0898 693 PANTHER DISEASE RESISTANCE PROTEIN RP 31 657 IPR044974 GO:0006952
Lele52g0898 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 427 IPR027417 -
Lele52g0898 693 FunFam Probable disease resistance protein At1g61300 149 317 - -
Lele52g0898 693 PRINTS Disease resistance protein signature 360 374 - -
Lele52g0898 693 PRINTS Disease resistance protein signature 184 199 - -
Lele52g0898 693 PRINTS Disease resistance protein signature 264 278 - -
Lele52g0898 693 PRINTS Disease resistance protein signature 614 630 - -
Lele52g0898 693 Gene3D - 5 112 - -
Lele52g0898 693 Gene3D Ribonuclease Inhibitor 554 676 IPR032675 -
Lele52g0898 693 Pfam Leucine rich repeat 572 628 IPR001611 GO:0005515
Lele52g0898 693 SUPERFAMILY L domain-like 492 654 - -
Lele52g0898 693 Gene3D - 326 412 IPR042197 -
Lele52g0898 693 Gene3D - 146 317 IPR027417 -
Lele52g0898 693 FunFam Probable disease resistance protein At1g63360 413 502 - -
Lele52g0898 693 Gene3D - 413 504 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0898 Lele-ChrLele52 5822201 5824282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0898 185 627 WRKY Transcription Factor Family AT5G45050 22.489 6.97e-09 57.4