Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0896 ATGGCAGAAAGTCCGGTGGTGTTCTTACTCGACAAGCTGACATCTTTATTGCAAGAAGAAGTTCTGCTTTTGAAGGGTGTTCGAACAGAGGTTCAGTTCATCAAAGACGAACTCGAACGCCTCAAGGCCATCTTAAGAATGGCCGATGCTTTGGAGGACAAAGACCCAGAACTCAAAGTTTGGGTGAAACAAGTCAGAGATGTAGCTCACGACATGGAAGACGCCATTGACGAGTTCACTATTCGCCTCGTAAACCATCGTGGCCATGGCCACAATTCTGCTCTCAGAAGGTTCTTTTCCGCCATTCAAGCTCTCAGAGCTCGGCATCGGATTGCTTCCGACATACAAGAAATCAAAGAAAGAGTAGAAAACGTCTCAAAGGAACGTCGCAGCTTAACTGAGACTAGTTCAAGCTCGAGTCTTTTTTATACATCGAGGCTTGATAGTCAAGGAGACGCGCTTCTGCTTGAGGAAGCTGATCTTGTGGGTATTGAGAAGCCAAAGAAACAGCTAATTGATTTGCTTTTGCAGGAGGAACAAGGAAAAGTGGTGATTCCTATCTATGGAATAGGAGGGTTGGGGAAAACCACAGTGGCTAAGCAAGTTTATGATGATCCAAAAGTGAAGAAACGTTTCAAGATGCATGCTTGGGTCACAGTTTCTCAATCCTTCAAGATCAAAGAGCTTCTGAGAGACATGGTTCAACAGCTTTATAAAGTTATTGGAAAACCAGCTCCTGCAGAAATTGGCACAATGAAAGTTGACAGTCTGAAGGAGATGGTCAAGAGTCTGCTTCAACAAAGTAGGTACCTCATCGTACTAGATGACATATGGAGGGTAAATTCATGGGATTCTATCAAACTTGCTTTGCCTAACAACAATTATGGTAGTAGAATAATGGTCACCACAAGGAACAAAGATGTAGCACTTTCTTGTCGTACTGAGTTACAAGGTAAGATCTATAACCTGGAATTCTTACCTCACAATGAAGCATGGTCTCTTTTCTGTAAGAAAACGTTTCAGGGGAATTCATGTCCTCCTCATTTAGAGGAGCCATGTAAGAGTATATTGAGAAGATGTGGGGGGTTGCCTTTGGCAATCGTGGCAATTAGCGGTGCTTTGGCTACGAAAGACAGAACCAACATGGAAGAATGGTCTGTTGTTAGTAGAAGTTTTGCATCTGAAATTGAAGGCAATGACAAAATGGAGGATATGAACAAAGTGCTTTCTCTAAGTTTCAATGACTTGCCTTACTATCTTAAATCCTGCCTGTTGTACCTGATCATCTTCCCAGAATTTTACGCCATCGAGCATATGAGGTTGATTCGGTTGTGGATAGCTGAAGGGTTTGTCAATGGAGAAGAAGGAAGGACACTAGAAGAAGTTGCAGAGAGGTACCTGAAGGAGCTCTTGAACAGAAGTCTGATTCAAGTGGTGGAGAAAGGCACCGATGGCAGGATGAAGACTTGTCGTGTTCATGACTTTCTTCGGGACATCATTAATTTGAAGTCAAGAGATCAGAACTTTGCAACAATAGCTAGAGACCAGGACATAATCTGGCCAGAAAGAGTTCGTCGCTTATCAGTAATGAATAGCTTACAGAACATACAGCAAAATAGGACCCCATTCCAATTGCGTTCTCTGCTGTTGTTTTCTTTAGCAGATTCACATGATCATATCTCCATATCTGCATTATTCTCACATGGTTGTAGGCTGCTCAAGGTGCTAGATCTGCAAGATGCACCTTTGGAATCATTTCCTACTGAAATTGTCAACCTTTACCACCTCAAGTATCTAAGCCTGAAGAATACCAAGGTAAAAAGCATTCCAGGATCCATTAAGAAGCTTCAAAACCTGGAAACATTAGATCTCAAACACTCCAATGTCACTGAATTGCCAGTTGAAATCTTGGAGCTGCATCGATTACGCCATCTCCTGGTGTATTTTTACGAGATCGAATCCTATGCTCATATCCACTCAAGACATGGTTTCAAGCTACCTGGTCCAATAGGGTGCATGCAATCTCTGCAAAAGCTTTGTTTTATAGAAGCAGACCAAGGAAGTCAAGAATTGATGGTTGAACTAGGAAAGCTGACTCAACTCAGAAGGCTGGGCATAAGAAAGCTGAAGAAAGAAGACGGGGCTGCTTTGTGTTCATCCATTCAGAAAATGACCAATCTCAGATCTTTATCCATAACTGCAATTGAAGAAGATGAGATCGTTGACATTCAAAACATTGCCAAGCCTCCACCATACCTGAGACAATTATACTTATATGGACGTTTAGAGAAGTTACCTGAATGGATACCTTCTCTACAGAATCTAGTTAGAGTGTATCTGAAATGGAGCAGGTTAGAGGAGGATCCTCTGGTGTATTTTCAAGATTTGCCAAATCTAATTCATCTCGAGTTTTTACAGGTTTATGTCGGCGAGACGCTGCATTTCAAGGCAGAGAAATTTCCAAGTCTGAAGCTTTTAGGCCTTGATGATTTGGATGGACTAAAATCCATGATGGTGGAGGAAGGAGCAATGCCTAATCTGAAAAGATTGATTATCCAGAGATGTGGATCATTGAAGAAGGTTCCCTCAGGTATAGAACATTTGAGTAAGCTAAAAGCAATTGACTTTTTTGATATGCCTGATGAATTGATCAATGCACTGAGTCCAAATGGAGGTGAAGATCATTGGAGAGTAGAACATGTACCTGCGGTTTATTCAACCTACTGGAAATCTGGTACATGGGATGTTTACTCATTGGATACTTTTGGAGAGAGAGATAGTTCTTCAAGTAATAATGTTGCAAGGAAAAGTCATGAGCTTCGTACACTTTGGAAGGTTTAA 2841 0.4164 MAESPVVFLLDKLTSLLQEEVLLLKGVRTEVQFIKDELERLKAILRMADALEDKDPELKVWVKQVRDVAHDMEDAIDEFTIRLVNHRGHGHNSALRRFFSAIQALRARHRIASDIQEIKERVENVSKERRSLTETSSSSSLFYTSRLDSQGDALLLEEADLVGIEKPKKQLIDLLLQEEQGKVVIPIYGIGGLGKTTVAKQVYDDPKVKKRFKMHAWVTVSQSFKIKELLRDMVQQLYKVIGKPAPAEIGTMKVDSLKEMVKSLLQQSRYLIVLDDIWRVNSWDSIKLALPNNNYGSRIMVTTRNKDVALSCRTELQGKIYNLEFLPHNEAWSLFCKKTFQGNSCPPHLEEPCKSILRRCGGLPLAIVAISGALATKDRTNMEEWSVVSRSFASEIEGNDKMEDMNKVLSLSFNDLPYYLKSCLLYLIIFPEFYAIEHMRLIRLWIAEGFVNGEEGRTLEEVAERYLKELLNRSLIQVVEKGTDGRMKTCRVHDFLRDIINLKSRDQNFATIARDQDIIWPERVRRLSVMNSLQNIQQNRTPFQLRSLLLFSLADSHDHISISALFSHGCRLLKVLDLQDAPLESFPTEIVNLYHLKYLSLKNTKVKSIPGSIKKLQNLETLDLKHSNVTELPVEILELHRLRHLLVYFYEIESYAHIHSRHGFKLPGPIGCMQSLQKLCFIEADQGSQELMVELGKLTQLRRLGIRKLKKEDGAALCSSIQKMTNLRSLSITAIEEDEIVDIQNIAKPPPYLRQLYLYGRLEKLPEWIPSLQNLVRVYLKWSRLEEDPLVYFQDLPNLIHLEFLQVYVGETLHFKAEKFPSLKLLGLDDLDGLKSMMVEEGAMPNLKRLIIQRCGSLKKVPSGIEHLSKLKAIDFFDMPDELINALSPNGGEDHWRVEHVPAVYSTYWKSGTWDVYSLDTFGERDSSSSNNVARKSHELRTLWKV 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0896 946 Gene3D - 150 317 IPR027417 -
Lele52g0896 946 Gene3D - 413 500 IPR036388 -
Lele52g0896 946 PRINTS Disease resistance protein signature 184 199 - -
Lele52g0896 946 PRINTS Disease resistance protein signature 264 278 - -
Lele52g0896 946 PRINTS Disease resistance protein signature 614 630 - -
Lele52g0896 946 PRINTS Disease resistance protein signature 360 374 - -
Lele52g0896 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 427 IPR027417 -
Lele52g0896 946 CDD RX-CC_like 2 127 IPR038005 -
Lele52g0896 946 Pfam NB-ARC domain 165 414 IPR002182 GO:0043531
Lele52g0896 946 Gene3D - 326 412 IPR042197 -
Lele52g0896 946 FunFam Probable disease resistance protein At1g63360 413 502 - -
Lele52g0896 946 FunFam Probable disease resistance protein At1g61300 152 317 - -
Lele52g0896 946 Gene3D Ribonuclease Inhibitor 501 888 IPR032675 -
Lele52g0896 946 SUPERFAMILY L domain-like 492 882 - -
Lele52g0896 946 Coils Coil 24 54 - -
Lele52g0896 946 Gene3D - 6 112 - -
Lele52g0896 946 PANTHER DISEASE RESISTANCE PROTEIN RP 31 859 IPR044974 GO:0006952
Lele52g0896 946 Pfam Rx N-terminal domain 7 93 IPR041118 -
Lele52g0896 946 Coils Coil 108 135 - -
Lele52g0896 946 Pfam Leucine rich repeat 572 628 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0896 Lele-ChrLele52 5811228 5814068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0896 184 627 WRKY Transcription Factor Family AT5G45050 22.126 4.33e-08 55.5