Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0892 ATGGCGGCCTCTATGGTCATAACCCACAATTTATCTCTTTCTTCCATCATCAACCCTAGCTATCCAAAATATCCTGTCAAGTCACCAATTGTTGCTCTCAATGGCGTTCGAAGCTCACAAAAGCATTCCATTTTGCAAAGCTCAGTCATACACATCGGAGGTTCTGGATTCAATTCCAGGTTTTTGAGTACGAGTACTGAAGAGAATTGCAGAAGTCGAGAAGTTCTGACGAAATCGGCTGAAACTGACGGTGGAAAAAATTCCACAATTGGCCAAAATGTGTTTGGGCTATTGCATTTGCTTGTCTCCTTGGGACTTATTCTTGCAATGGACAATTATCTTAAGAAAGCCTTCGTGGCTGCTGCGATTAAATTCCCTAGTGCACTGTTTGGGATGTTTTGTATATTCTCCGTTTTGATTATTCTTGATTCCACTGTGCCATCTGCAGCCACAGCCTTGATGAACTTCTTCGAACCGGCGCTTTTGTTCATTCAAAGATGGCTCCCCTTGTTCTATGTTCCATCTTTGGTTATCTTGCCCCTTTCTGTTAAAGATATTCCAGCTGCTTCGGGCATCAAGATTAGCCTTATCGTAGTTGGAGGTTGGCTTGCTACACTATTGGTTGCTGGTTTCACAGCAATAGCAGTACGAAAAGCTGTGAAGACTGAAATGGTTGATGCTGAGCCTATGAAAAAACCCTCTCCATTTTCTGCCCTTGAAGTGTGGGCTTGGACTGGGGTTCTCCTTGTCTCATTTGTGTCGGCACTATTTTATCCAACTGCACTGGGGACAAGTGCCAGAACCTGTCTTCCTTTCTTACTTGCGTCCACAGTGTTAGGCTATATGGTCGGTTCTGGGTTGCCATCAGATGTGAGGAAAGTATTTCATCCAATCATTTGCTGTGCTCTTTCAGCAGATCTGACAGCTTTGGCTTTTGGATATGCTTCGTTGTTGGGGTTTGAGCCTGTTCTAGGATATTACCTTACAAAGGTATCCTCTAACCCAGGAGCTGGTGACATTTTAATGGGATTTTTGGGATCTGTCATTCTCTCTTTTGCCTTCTCTATGTTCAAGCAAAGAAAGCTTGTGAAAAGGCATGCAGCTGAGATTTTCACCTCTGTCATAGTCTCAACAGTATTCTCATTGTACTCAACTGCTCTTGTCGGACGTCTCCTGGGATTAGAGCAATCTTTAACCGTTTCCATTCTACCCAGATGTATAACTGTTGCCTTGGCCCTTAGCATTGTGTCTTTATTTGAAGGTACCAACTCATCTCTGACAGCAGCTGTGGTCGTAGTAACAGGTCTGGTTGGAGCAAATTTTGTGCAAGCAACACTTGATAAATTTCGTTTCCGCGATCCAATCGCTCGAGGAATTGCAACTGCATCTAGTGCTCATGGACTTGGAACAGCAGCACTATCAGCTAAGGAACCTGAGGCTCTGCCATTTTGTGCTATTGCTTATGGTCTGAATGGTATCTTTGGATCTATTCTTTGCTCCATTCCTGTTGTTAGACAAAGCTTGCTTGCTGTTGTTGGCTGA 1542 0.4377 MAASMVITHNLSLSSIINPSYPKYPVKSPIVALNGVRSSQKHSILQSSVIHIGGSGFNSRFLSTSTEENCRSREVLTKSAETDGGKNSTIGQNVFGLLHLLVSLGLILAMDNYLKKAFVAAAIKFPSALFGMFCIFSVLIILDSTVPSAATALMNFFEPALLFIQRWLPLFYVPSLVILPLSVKDIPAASGIKISLIVVGGWLATLLVAGFTAIAVRKAVKTEMVDAEPMKKPSPFSALEVWAWTGVLLVSFVSALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVRKVFHPIICCALSADLTALAFGYASLLGFEPVLGYYLTKVSSNPGAGDILMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIVSTVFSLYSTALVGRLLGLEQSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLVGANFVQATLDKFRFRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYGLNGIFGSILCSIPVVRQSLLAVVG 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0892 513 PANTHER PUTATIVE SEROTONIN TRANSPORTER 71 510 IPR007300 -
Lele52g0892 513 Pfam LrgB-like family 277 501 IPR007300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0892 Lele-ChrLele52 5785486 5789068 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0875 49 5402647 5407495 Lele52g0892 52 5785486 5789068 hybridization
Lele50g0912 50 5750319 5756092 Lele52g0892 52 5785486 5789068 hybridization