Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0890 ATGGCTGGTCTGCAAAACTCATTGATCTATCTTCACAACTTTCTCATCCTATTACTGTGTTGTATCGAAGCGATTGCAGAAACCAACACTCTGAATCAATCAGACACACTCAACTCCACAAGTCGCTTGGTTTCCAACAACAAGAATTTCACCTTAGGATTCGTCAAACCTGTCTCCTATAGCAACAACACTTATTTAGCAATCTGGAATTCCAAATATGAGTCACCTTCATCACCAGTTTGGATCGCCAATAGAGACACCCCTATCACTAACGGTTCTGATCCAACTCTCTTCATCGACAACAACACTGGAAAGCTCGTCATCAATCGAACTCATGGCCACCCAATTCAACTATGCCCCGGCGACGAAACCACTACCAAAAACAACAACGTTAACAGCACCAACACAAAGGCTGCTTTGCTGGACAATGGGAACCTTGTACTGAGAGAAGTGAACTCCAATGGATCTGTCGGTCGAACCTTGTGGCAGAGCTTTGATTGTCCCACAGACACTCTTTTACCCGGCATGAAACTTGGCGTCAATCACAGAACAGGAAGGAACTGGTCTCTAACCTCATGGCTAGCTTCAGATGATCCATCTCCAGGAGCTTTTACACTCGAATGGGACCCACATGGATTAGAGCTGGTTCTTCGACGTAGAGGGGTTGTGTTTTGGAAAAGTGGGGCCTTGACTGATGATCCTGATGACGATGGAATGACATTTGGGAACATAGGACAAACCACCTCCAACCTTATACATCCTTACAAGATGATGTATAGGACAACTTCAGATGAAGAGTTCTTCAATTATGCTTTGAAACATGATCGTATGGATCCTTATACTCATGAAAGCATAGTATGGAGAATCGATTACGATGGTAGTTTTTGGTTTGAGAATAGTGGAGTGCCATTAAGGGATTATTGTTATGGGTACAAGACAAATGAATACGAGGGTTGTGCAGAATGGGAACAGCCTCAGTGTAGGATTTACAATACAACGTTTGAGTTGTTTTCTGGAGACTTTGTGAATAAAAGTGATGGAAGCTTTGTTGATGTTGATGGTAAAAGGATTGGTCCTGCTGATTGTAGAGTTAGTTGCTGGAATGATTGTGATTGTCAAGCATATCAGAAAATGGGCACGTTAAGTTGTGTTCAATATCAACAAGATGCAGAGTTTCGACCTGATCCGTCCGGGAATTCGCCTCAATTTTATGTCATCCGACAACCACGAAATAGCTTTGAAGAAAGGAACAAGAAGAAATGGATTGCAATTTCAGTTCCCATGGCAATATTATTGTTGTTAGCGTCTGTCATTGTTATAATCTTTTATTGGAAACGGAAAACAGAAGGAGTGCTTTCAATTCTAACAAGTTGTCGCTTCTTGTTTCTTATCAGTGGTTACATGTCTCCTGAGTATGCAATGGATGGAATGTTCTCCATAAAATCAGATATATTCAGCTTTGGCGTCATAATCCTTGAAATTTTAAGTGGCAAGAGAAACAACAGCTTCTATAACATTAATAAACCTATGAATTTAGTAAAATACGCTTGGGATTTGTGGCAAAATGGAGTTGGCTTAGAGTTGATGGATCCAACATTAAGTGATTCATGTTCCAACCAACAATTCCTTAGATTTATTCATATAGGTCTTTTGTGCGTGGAAGAATCTCCAGCAGATAGACCAACTACTTCAGAAGTCATTTTTATGATCACAAATGAAAGTACCATTCTGCCGATGGTAAAGAAACCTGCATTTACAAATTTAGTGAGTGTCACTGATGTAGATTCTCAAAAAGATGACTTAGAATACCATTCCACCAACAATATGTCCGTATCTACCATGAATGGAAGATAG 1854 0.4035 MAGLQNSLIYLHNFLILLLCCIEAIAETNTLNQSDTLNSTSRLVSNNKNFTLGFVKPVSYSNNTYLAIWNSKYESPSSPVWIANRDTPITNGSDPTLFIDNNTGKLVINRTHGHPIQLCPGDETTTKNNNVNSTNTKAALLDNGNLVLREVNSNGSVGRTLWQSFDCPTDTLLPGMKLGVNHRTGRNWSLTSWLASDDPSPGAFTLEWDPHGLELVLRRRGVVFWKSGALTDDPDDDGMTFGNIGQTTSNLIHPYKMMYRTTSDEEFFNYALKHDRMDPYTHESIVWRIDYDGSFWFENSGVPLRDYCYGYKTNEYEGCAEWEQPQCRIYNTTFELFSGDFVNKSDGSFVDVDGKRIGPADCRVSCWNDCDCQAYQKMGTLSCVQYQQDAEFRPDPSGNSPQFYVIRQPRNSFEERNKKKWIAISVPMAILLLLASVIVIIFYWKRKTEGVLSILTSCRFLFLISGYMSPEYAMDGMFSIKSDIFSFGVIILEILSGKRNNSFYNINKPMNLVKYAWDLWQNGVGLELMDPTLSDSCSNQQFLRFIHIGLLCVEESPADRPTTSEVIFMITNESTILPMVKKPAFTNLVSVTDVDSQKDDLEYHSTNNMSVSTMNGR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0890 617 SUPERFAMILY Protein kinase-like (PK-like) 466 590 IPR011009 -
Lele52g0890 617 CDD B_lectin 34 168 IPR001480 -
Lele52g0890 617 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 460 561 - -
Lele52g0890 617 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 453 575 - -
Lele52g0890 617 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 199 IPR036426 -
Lele52g0890 617 Pfam Protein tyrosine and serine/threonine kinase 467 514 IPR001245 GO:0004672|GO:0006468
Lele52g0890 617 Gene3D - 23 166 IPR036426 -
Lele52g0890 617 SMART blect_4 28 168 IPR001480 -
Lele52g0890 617 Pfam D-mannose binding lectin 79 193 IPR001480 -
Lele52g0890 617 ProSiteProfiles Bulb-type lectin domain profile. 28 161 IPR001480 -
Lele52g0890 617 Gene3D Transferase(Phosphotransferase) domain 1 453 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0890 Lele-ChrLele52 5772952 5776219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0890 466 611 Receptor kinase-like Gene Family AT4G11530 49.660 2.22e-39 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele52g0890 B_lectin 1.4e-28 No_clan