Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0877 ATGGCAGCTTCAAGCTCTCTTCTAAAGTTGGATCAGATTCCAGGTAAAGGAAGAGGTTTAGTTGCAGCTCAAAATCTCAAAGCCGGCCAAATCGTCCTCACTGAATCTCCCATCGTTCTCTATTCCACTTTCTCTCTCTTCTCTGAATCATCTTCTTCTTCTTCCTCTTACTGCGACCACTGCTTCAGATCAATCTCACCATCTTCAACCTCATATTCATGCCCTTCTTGTTCGCGCCACCATTTCTGTAGCCAGAAATGTCTCTCTCTTGCTCTCAGATCTTCTCACTCTTCATGGGTATGTCAAGCTCTGTCTTCTCTTCGAGATTCTGGTTCAGATCTTCTTCATCAATCCCATGAACTTCAAGTCCAAGCTCGTTTCGTTGTCGCTGTTTATAACGTCTCTCTGCTTTCCCCTTCTAGTATTCAGATCATGCTTTCTCTTATGGGAACCCCAGATGACGCCATTATTAAAGCTTCAAGCTTTCTTCACTCTCTTATCTCTTCTCTGTGCCCACCACCTCAGGATCATCAGCTCTGTGCAGAACTCACAGCTCAACTCATGGCTAAAGATAGGCTTAATTCTTTCTGCTTAATGGAACCTTATTCACCAGATGGTCCTCAGAGATCCATCAAGGCATATGCTATTTACCCAAAAGCAACTTTCTTTAACCATGATTGTCTTCCGAATGCATGCAGATTCGATTACGTCGATGGTGGTGTTCCTGGTGGAGATGAACATAACATAGACATTGTTATCAGGATGATTGAGGATGTTGCAGAAGGGAGAGAAGTTTGCATAAGCTATTTCAGAATCAATAGGGATTATTCAACGAGGAAGAAGATCTTGATGGAAGATTATGGGTTTGTTTGTGGGTGTGAAAGGTGTAAGATTGAAGCCAACTGGGTTGTTGATGATGGTAATGATCAGAGAAGTAGTGATTTGCGTCACGAGTGGTTCTTGAAGAAGTATGTGTGTGATAAGATGAACTGTTCTGGTACGTTGGCTCCTTTGCCTCCAAAGGATGATGATGGTGAGAAATCTAATGTCTTGGAATGTAATTTCTGTTGCAATTTGAAAGTGGAGGTTGCTTGA 1095 0.4247 MAASSSLLKLDQIPGKGRGLVAAQNLKAGQIVLTESPIVLYSTFSLFSESSSSSSSYCDHCFRSISPSSTSYSCPSCSRHHFCSQKCLSLALRSSHSSWVCQALSSLRDSGSDLLHQSHELQVQARFVVAVYNVSLLSPSSIQIMLSLMGTPDDAIIKASSFLHSLISSLCPPPQDHQLCAELTAQLMAKDRLNSFCLMEPYSPDGPQRSIKAYAIYPKATFFNHDCLPNACRFDYVDGGVPGGDEHNIDIVIRMIEDVAEGREVCISYFRINRDYSTRKKILMEDYGFVCGCERCKIEANWVVDDGNDQRSSDLRHEWFLKKYVCDKMNCSGTLAPLPPKDDDGEKSNVLECNFCCNLKVEVA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0877 364 ProSiteProfiles SET domain profile. 6 270 IPR001214 GO:0005515
Lele52g0877 364 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 306 362 IPR044238 -
Lele52g0877 364 Gene3D - 116 195 - -
Lele52g0877 364 SUPERFAMILY SET domain 10 297 IPR046341 -
Lele52g0877 364 CDD SET_SMYD 193 296 - -
Lele52g0877 364 SMART set_7 6 276 IPR001214 GO:0005515
Lele52g0877 364 Pfam SET domain 17 269 IPR001214 GO:0005515
Lele52g0877 364 Gene3D - 57 110 - -
Lele52g0877 364 Gene3D SET domain 19 297 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0877 Lele-ChrLele52 5696599 5697693 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele52g0877 SET 1.6e-10 No_clan