Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0857 ATGAAATGGCAATGGCCATGGCTGGTTAATGTTTTGCTGATATGTATTGTAATCACGAAAAATGAAGCGATCAGCCCTGACGGTGAGGCGCTTCTCGGTTTCAGGACAGCAGTTGTTAGCTCAGATGGTATCTTGTTACAATGGAGGCCTGAGGATCCTGACCCATGCAAATGGTGGGGAGTGAGATGCGATCCAAAATCCAAGAGAGTTACAAATCTGAGTTTAGCTCGCCGTAAGTTGAGTGGATCTATACCACCTGACCTTGGGAGGCTAGAGCATTTGACTGTTCTTGCTCTTCACAACAACAATTTCTATGGGACAATTCCATCTGAATTGGGAAATTGCACTGAGTTGCAGAGAATATTCTTGCAGGGCAATTACCTCAGTGGAACGATTCCAAGTGAACTAGGAAACCTGTCACAGCTCAGAAGTTTGGATATATCAAGTAACTCTCTCAGTGGGAATATACCCCCATCACTTGGGAAACTGTATAATCTTAAAAATTTTAACGTTTCAACCAATTTTCTGGTCGGACCAATACCTTCTGATGGTGTGCTTGCTAAGTTTACTGTAGACTCCTTTGTTGGTAATCGTGGTTTATGTGGAGCGCAAATCAATGTAATTTGTAAAGATGGTTCACCTACAAATCAATCCTCAACCTTGGATCCAAACCAGAATGGAAAGAAGAAATATTCTGGTCGGTTGCTTATCAGTGCATCAGCAACAGTTGGTGCGCTTCTTTTAGTGGCACTCATGTGCTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAAAATGACCGAAAAAGTCTGGCGATGGATGTTGGTGGAGGAGCTTCAATTGTAATGTTTCATGGAGATCTACCATATTCTTCAAAAGACATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATTGGATGTGGAGGATTTGGTACAGTTTACAAGCTTGCAATGGATGACGGCAACCAATTTGCTTTGAAAAGGATTGTTAAGTTGAATGAGGGCTTTGATCGTTTTTTTGAGAGGGAACTTGAAATTCTTGGAAGCATAAAACACCGTTATCTAGTAAACTTACGAGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGATTACCTACCTGGTGGAAGTCTTGACGAAGTTCTTCATGAAAAATCTGAGCAGCTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCGAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCGAGGGTCATACACCGTGACATAAAGTCAAGCAATATTTTGCTTGATGGCAACCTGGATGCTCGAGTCTCTGATTTTGGGCTTGCCAAACTTCTAGAGGATGAAGAATCTCATATAACCACCATTGTTGCTGGAACGTTTGGATATCTAGCCCCAGAGTACATGCAAAGTGGTAGGGCAACTGAAAAAACTGATGTTTACAGTTTTGGTGTCTTGGTGCTTGAAGTGCTAAGTGGGAAGCGTCCAACAGATGCATCATTCATTGAAAAGGGTCTAAATATTGTTGGTTGGCTGAATTTTCTCATTACTGAAAATAGGCAAAGAGAGATTGTTGATCCCTTATGTGAGGGAGTGCAAGTAGAGAGCCTCGATGCCTTGCTCTCAGTGGCTATTCAGTGTGTTTCTTCAAATCCAGAGGATCGGCCCTCGATGCATCGAGTAGTCCAGGTGCTCGAATCAGAGGTCATGACCCCATGCCCAAGTGATTTTTATGACTCTGAGTAG 1758 0.4215 MKWQWPWLVNVLLICIVITKNEAISPDGEALLGFRTAVVSSDGILLQWRPEDPDPCKWWGVRCDPKSKRVTNLSLARRKLSGSIPPDLGRLEHLTVLALHNNNFYGTIPSELGNCTELQRIFLQGNYLSGTIPSELGNLSQLRSLDISSNSLSGNIPPSLGKLYNLKNFNVSTNFLVGPIPSDGVLAKFTVDSFVGNRGLCGAQINVICKDGSPTNQSSTLDPNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRKSLAMDVGGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYKLAMDDGNQFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHEKSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRVIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRQREIVDPLCEGVQVESLDALLSVAIQCVSSNPEDRPSMHRVVQVLESEVMTPCPSDFYDSE 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0857 585 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 276 377 - -
Lele52g0857 585 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Lele52g0857 585 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 186 - -
Lele52g0857 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Lele52g0857 585 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Lele52g0857 585 ProSitePatterns Protein kinases ATP-binding region signature. 308 334 IPR017441 GO:0005524
Lele52g0857 585 ProSiteProfiles Protein kinase domain profile. 302 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0857 585 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 70 571 - -
Lele52g0857 585 SMART serkin_6 302 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0857 585 SUPERFAMILY L domain-like 25 183 - -
Lele52g0857 585 Pfam Protein kinase domain 304 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0857 585 SUPERFAMILY Protein kinase-like (PK-like) 287 569 IPR011009 -
Lele52g0857 585 Gene3D Transferase(Phosphotransferase) domain 1 378 576 - -
Lele52g0857 585 Gene3D Ribonuclease Inhibitor 25 210 IPR032675 -
Lele52g0857 585 Gene3D Phosphorylase Kinase; domain 1 277 377 - -
Lele52g0857 585 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 378 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0857 Lele-ChrLele52 5546041 5552311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0857 1 578 Receptor kinase-like Gene Family AT2G35620 75.130 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lele52g0857 Pkinase 7.6e-47 CL0016