Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0850 ATGGAAGTATTGAGCCGGGCGGGATTTATTTGTCCGGACGGACGAGTGTCGGTTCTTGGGTTCTCTGCATATGGCCTAAATAGATACGATTCCTTTTTTTTTTTTTTCGTCTTTCTTCGTCAGACGGAAACTTCATTTCCTTTTAACTTTATCACTTCAATCACTCCAACTCACTCGTTAAATTTGCTTAAATCAGCTCGCCACATTCCTCTTTCCCCATTCCAGCATTTTGTAAAGCGGTGTCCTCGCCTGGGTTTCTTTCCCTTACTTCCCTTATTTCGGCTGCTTGGGCTTCTCATTCAGCATTTTCCTTTCAGAATCTCCAGAATGGAGAGTGCAAGAATGAGCCAAGTTTTGATATTGAATCTTCTGGTATTTCTATTGATATTGCTGAAAGCAGAAGGCTTCTTTGTACCAATCACTTATATTAAGGATGCGGTAGGGAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTTGATAAGGGTTCTGGATCAGGGATTAACAACTGGCTCATACACATTGAGGGAGGAGGATGGTGCAACAATGTCACTACGTGCCTTTCGCGAAAGAGCACTCGCTTAGGTTCGTCTAAGCAAATGGCCAAGCAGGTTGCCTTCTCTGGAATGCTAAGCAACAAGGAAAAATTTAATCCAGATTTCTACAATTGGAATAGAATCAAGGTTAGGTATTGTGATGGTGCATCATTCACTGGTGATGTGGAAGCAGTGGATTCAGACACAAATCTGCACTTCAGAGGAGCAAGAGTTTTCGTTGCGATCATTGAGGATTTACTGGCAAAAGGAATGAAAAATGCTGAAAATGCTGTTCTCTCTGGCTGTTCAGCTGGAGGATTGACTTCTATATTGCATTGTGATCGCTTTCGAGCTCTAATACCTGCTAGTGCTAAAGTGAAATGTTTTTCAGATGCTGGTTACTTCATTAATGCAAAGGATGTCTCAGGAGCACAACACATTGAACAATTCTACAGTCAAGTTGTTGAAACCCATGGTTCAGCAAAAAATTTACCTCGATCCTGCACTTCAAGACTCAGCCCGGGACTTTGCTTCTTCCCACAATATGTAGTATCACAAATCACTACCCCAATTTTCTTTATAAATGCAGCCTATGACTCATGGCAGATAAAAAATATTTTGGCACCGGGTGTCGCTGATCCCCATGGCCGCTGGCATAGCTGCAAGCTTGATATAAGCAACTGCTCACCCGATCAACTTACTGTAATGCAAGGTTTCAGGTTGGACTTTTTGAAGGCAGTGACCGTACTGGGCAACACGCCGTCGAAAGGAATGTTTATAGACTCTTGCTATGCCCACTGCCAAACAGAAATGCAGGAGACATGGCTAAGAAGCGACTCTCCAGTGCTGCACAACAAAACAATTGCAAAAGCAGTAGGAGACTGGTACCATGATCGAAGTCCTTTCCATCAGATTGATTGCCCCTACCCTTGCAACCCCACTTGTCACAACCGTGTTTTCGAGCCAGACCACCCTTCATCAGTATAG 1533 0.4364 MEVLSRAGFICPDGRVSVLGFSAYGLNRYDSFFFFFVFLRQTETSFPFNFITSITPTHSLNLLKSARHIPLSPFQHFVKRCPRLGFFPLLPLFRLLGLLIQHFPFRISRMESARMSQVLILNLLVFLLILLKAEGFFVPITYIKDAVGKGAVCLDGSPPAYHFDKGSGSGINNWLIHIEGGGWCNNVTTCLSRKSTRLGSSKQMAKQVAFSGMLSNKEKFNPDFYNWNRIKVRYCDGASFTGDVEAVDSDTNLHFRGARVFVAIIEDLLAKGMKNAENAVLSGCSAGGLTSILHCDRFRALIPASAKVKCFSDAGYFINAKDVSGAQHIEQFYSQVVETHGSAKNLPRSCTSRLSPGLCFFPQYVVSQITTPIFFINAAYDSWQIKNILAPGVADPHGRWHSCKLDISNCSPDQLTVMQGFRLDFLKAVTVLGNTPSKGMFIDSCYAHCQTEMQETWLRSDSPVLHNKTIAKAVGDWYHDRSPFHQIDCPYPCNPTCHNRVFEPDHPSSV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0850 510 Pfam Pectinacetylesterase 132 483 IPR004963 GO:0016787
Lele52g0850 510 PANTHER NOTUM-RELATED 122 499 IPR004963 GO:0016787
Lele52g0850 510 SUPERFAMILY alpha/beta-Hydrolases 252 383 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0850 Lele-ChrLele52 5494873 5498629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0850 114 507 Carbohydrate Esterase AT4G19420 62.791 0.0 583
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0850 52 5494873 5498629 Lele52g0850 52 5494873 5498629 ECH
Lele50g0864 50 5435966 5439709 Lele52g0850 52 5494873 5498629 hybridization