Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele52g0841 | ATGAACCCGCTTTTTTCTTCGTTAAAAGAGCAAATGACGATTCTTGTTCTTTGGTTGTACCCAAACCTGCAGATTCTTCTTCACCCATTGAAGCAACCCTCCCACCAAACCCTAACGCTACAATCTAAACCTTCCAGTTCGAACATTTCTCTTCTTCTTCTTTTCCTACGTTTTTTTTGCTGGTTCCCGCCCTTTCCTTCATCGCCCACTTGGCTGGAATTTCTATTTTCTCAAACAGACGTTCATCTCATTCACTTCATGGCGAGTGATTCTGGCACAAAACCTTCCCCTGCTTCTTCGTCTTCTTCAACTGCAGGGGAATCTTACATTGGGAGCTTTATCAGTCTGATTTCCAAGTACGAGATTCGTTACGAAGGCGTTTTGTATCACCTCGACGTCCAGGATTCCACCATTGGCTTGACGAGCGTTAGATCTTATGGGACAGAGGGGAGAAGAATAGATGGTCCACAGGTTCCTCCAAGTGACAAGGTTTATGAATACATTATTTTTCGAGGAAGTGACATTAAGGATTTGCAGGTCAAGTCCCCCTCTACATCTATCAAAGAAGAGCAGGTATTCAGTGATCCAGCTATTATCCAGTCACAATATTCTGAAGTTCCTTCAAGTTCTCCTATGGCTTCAGTGGGTGGGAGAAGTTTGACAGAATCAATTCAATGGCAAGATACTCCTGCTATGGCCCATAGAGACATTCCTCTTCCTGCTGGGTTGCCTTCTCATCAACCTGCAACATTGATGGGCCCATCTGGTCAATCTGCTGTTACTCATGTTTCTGCTGCTCCTTCTTTCTCCACAACAGTGTATTGGCCAGAGTATAGTGGGATATCAGGAAGTAGCTCTGATTCTATGCTGCAGTCTGGTCCTTTTCAGTCCCCTTCAGGAGTGGCACCTTTAAATACACAGAGCTGGGTCCAAACTCCAGAAAGTCAATTACGTTCTTCAAAAGTGGGCTGGACTACTTTACCAGAGCATGGTGAACCTGTCTCATCTGTTACCGCTTCATCTCTTGTAAATCCGTCTTACAAACCTTCATCTTCCTCTTTACAAACTTCTGATTCTCTAGATTCTCCATCTCTTTTCTCTTCTAAGACATCATTCCCCTATCATTCTTCTGTGGCTGAGTCGAACATGCCTTCATTTTCTTCACCATTTCAAGGCATAAATTCTGTCAAAGATCAATTTCCTGGAAAAATTTCTCCTTATATGGGATCAATGTTTCCTGGACAATCTGCCCATCATTCTGTTTCTTCATCAGTTGATTCTACTTCAGGCTCCTTGCTTAGACCTCCATCCTTTTTTACTCCAGATCAGTTTGCTCATTCTGGACAGAATTTTGTTTCTTTAGTACAGAACCAGATCCCTGATCAGAATCATATGGTTTCTCTGGCACAACAATCCCCTAGCTCCTCATTTTTATTACCTTCTCCAGAATTTCAAGCACCATTGTTGCCTTCACCACCATTGTCAACTTCAGTGCACAAGCCTCAGTACTCAGCCTCACAGTTCAGTGAAGAGTTTGATTTTGAGGCCATGAACGAAAAGTTCAAGAAGGATTCAGTATGGGGCTCTCTTGGGAGGGCATCTAAGACAATAGAAGGAATGGAGGGTAATGCTCCAACTGACAGCTTGGTTGACAGAGAGTGTCGTGGCTTTCAACCTAACCTAAACCCCCAGCCTGCATATAGGAAAGACGACTTTTTTGACACAATTTCATGTAACTCTCTCTCTCGAGGATCAAGGAATGGACAGAATCGCCTATCTGAGAGAATGAAGCTGGATTCTGAGACGTTCGGCAATTTTTATCGGAGCCCTGCTATGGGTTATGGTAGCTATGGTAGTGGACGCGGTGAATATTACAAGAACTCATACAATATGGGAAGGGGTTATAGCTATTATGGTGGAAGAGGGCGTGGCAGGAATATGCCTTTCTATTAG | 1953 | 0.4357 | MNPLFSSLKEQMTILVLWLYPNLQILLHPLKQPSHQTLTLQSKPSSSNISLLLLFLRFFCWFPPFPSSPTWLEFLFSQTDVHLIHFMASDSGTKPSPASSSSSTAGESYIGSFISLISKYEIRYEGVLYHLDVQDSTIGLTSVRSYGTEGRRIDGPQVPPSDKVYEYIIFRGSDIKDLQVKSPSTSIKEEQVFSDPAIIQSQYSEVPSSSPMASVGGRSLTESIQWQDTPAMAHRDIPLPAGLPSHQPATLMGPSGQSAVTHVSAAPSFSTTVYWPEYSGISGSSSDSMLQSGPFQSPSGVAPLNTQSWVQTPESQLRSSKVGWTTLPEHGEPVSSVTASSLVNPSYKPSSSSLQTSDSLDSPSLFSSKTSFPYHSSVAESNMPSFSSPFQGINSVKDQFPGKISPYMGSMFPGQSAHHSVSSSVDSTSGSLLRPPSFFTPDQFAHSGQNFVSLVQNQIPDQNHMVSLAQQSPSSSFLLPSPEFQAPLLPSPPLSTSVHKPQYSASQFSEEFDFEAMNEKFKKDSVWGSLGRASKTIEGMEGNAPTDSLVDRECRGFQPNLNPQPAYRKDDFFDTISCNSLSRGSRNGQNRLSERMKLDSETFGNFYRSPAMGYGSYGSGRGEYYKNSYNMGRGYSYYGGRGRGRNMPFY | 650 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele52g0841 | 650 | Pfam | FDF domain | 507 | 605 | IPR019050 | - | |
| Lele52g0841 | 650 | ProSiteProfiles | FFD box profile. | 565 | 580 | IPR025761 | - | |
| Lele52g0841 | 650 | SMART | LSM14_2 | 103 | 203 | IPR025609 | - | |
| Lele52g0841 | 650 | MobiDBLite | consensus disorder prediction | 331 | 360 | - | - | |
| Lele52g0841 | 650 | SMART | FDF_2 | 506 | 607 | IPR019050 | - | |
| Lele52g0841 | 650 | SUPERFAMILY | Sm-like ribonucleoproteins | 108 | 183 | IPR010920 | - | |
| Lele52g0841 | 650 | MobiDBLite | consensus disorder prediction | 325 | 360 | - | - | |
| Lele52g0841 | 650 | Pfam | Scd6-like Sm domain | 109 | 182 | IPR025609 | - | |
| Lele52g0841 | 650 | MobiDBLite | consensus disorder prediction | 285 | 305 | - | - | |
| Lele52g0841 | 650 | ProSiteProfiles | DFDF domain profile. | 500 | 536 | IPR025762 | - |
Showing 1 to 10 of 14 entries
Duplication type information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele52g0841 | 52 | 5398636 | 5403419 | Lele52g0841 | 52 | 5398636 | 5403419 | ECH | |
| Lele49g0817 | 49 | 5013989 | 5018169 | Lele52g0841 | 52 | 5398636 | 5403419 | hybridization | |
| Lele50g0854 | 50 | 5336847 | 5343579 | Lele52g0841 | 52 | 5398636 | 5403419 | hybridization |
Showing 1 to 3 of 3 entries