Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0809 ATGTTCTTCTTCATCCTACATTCGCTTACCTTGTTTCTCCAAACAAAGGTGTTATGCTTCACGTACAAGGTTGGAGATTTAGATTCCTGGGGAATCCCCACCTCTTCAAACCCTGACCTCTACACCAAATGGTCCAATCATACCATTCTCAACATCGGAGATTCCATCTTGTTCTTGTATCCACCGAGTCAAGACTCAGTGATCCAAGTGACGGCCCAGTCTTACAAGACTTGCAACCTTAAAGATCCCATACTCTTCATGAACGACGGCAACTCTCTCTTCAATATTACGTCTAATGGAGTATTCTACTTCACCAGTGCAGAAGCAGGCCATTGCCAGAAGAAGCAGAAGCTTCGTCTAGTTGTCGGTGATGGAAATGGTGTTTTGCCCTCTGATGCTCCCACCACTGCCTTGCCTGAAAACGCCGCCGATGCGCCGTCGTATCCCACTGTGTTTGGAAGCATTCCGGTTACTGCTTCTTCTGCTTCTGGTCTTTCTCTTTTCATCTTTACTCTTCTTGGATTGGTCCTCTCTCTTTCTCATTAG 546 0.4615 MFFFILHSLTLFLQTKVLCFTYKVGDLDSWGIPTSSNPDLYTKWSNHTILNIGDSILFLYPPSQDSVIQVTAQSYKTCNLKDPILFMNDGNSLFNITSNGVFYFTSAEAGHCQKKQKLRLVVGDGNGVLPSDAPTTALPENAADAPSYPTVFGSIPVTASSASGLSLFIFTLLGLVLSLSH 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0809 181 ProSiteProfiles Phytocyanin domain profile. 20 124 IPR003245 GO:0009055
Lele52g0809 181 SUPERFAMILY Cupredoxins 19 122 IPR008972 -
Lele52g0809 181 Gene3D - 20 130 IPR008972 -
Lele52g0809 181 FunFam Early nodulin-like protein 1 19 126 - -
Lele52g0809 181 PANTHER BLUE COPPER PROTEIN 19 136 IPR039391 GO:0009055
Lele52g0809 181 Pfam Plastocyanin-like domain 39 115 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0809 Lele-ChrLele52 5139196 5139809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0809 1 157 Phytocyanin Superfamily AT1G64640 54.375 2.62e-52 164