Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0808 ATGGATTCCGGCGTTGGTTTGTCTGTTGGAAAGTTTGAGAACGATGATGCTGATGTTGTGGAGAAAGATCCTAACGGACGTTACATACGGTATGGTGATATGTTGGGGAGAGGAGCATTCAAGACTGTATATAAGGCATTTGATGAAGTTGATGGGATAGAAGTTGCCTGGAACCAAGTGAATATTGAGGACGTTTTGCAGTCTCCACAACAATTGGAAAGGTTATATTCTGAGGTTCATCTCCTAAAGTCATTGAAACATGAAAACATCATCAAGTTACATAATTCTTGGGTGGACGATACAAACAAGACCATTAACATGATAACCGAGTTATTCATCTCTGGGAGTTTGAGACGATATCGAAGAGTGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCAAGGCAAATTCTTCAAGGTTTATGCTATCTGCATAGCCACAATCCTCCAATTACCCATAGAGATTTGAAATGTGATAATATTTTTATTAATGGTAATACTGGAGAAGTTAAGATTGGAGATCTTGGACTGGCAACTGTCCTACGGCAACCTACTGCACGGAGTGTCATTGGGACACCAGAGTTCATGGCTCCTGAGCTTTATGAAGAAGAGTATAATGAACTTGTTGACATATATTCTTTTGGCATGTGCATGTTAGAAATGATCACCTGTGAGTACCCATATAGCGAATGCAAAAATCATGCACAGATGTATAAGAAAGTTACCTCTGGAATAAAGCCTGCTGCTCTTGGTAAAGTGAATGATCCACAAGTGAAGCAATTCATAGAGAAATGTTTAGTTCCAGCATCTAAGAGATTGCCTGCATCTGAGCTATTGAAGGATCCATTTCTTGCTACTGACAACATAAAGGAGATCAACCATGCACTGCAGTTGCCCAATCGCATGACAGAATTGGTGACACCACCAACAATTGAGCCACGTCCCATGGAGATAGACCAAACCATCAAGGATAATTTACCTGGCTCCTGTTTGGAAGTTACTGAAGAAACTCCTCAAATATTAACTCTAGATTTCCTTAGGAAGGATAAGGGTAATGAATTCAGGTTACGAGGGGAGAAAAATGCTTCAGACAGAACGATTTCGCTCAACCTGCGCATTGTTGAGGCGAATGGTCACGCAAGGAATATCCACTTTCCATTCTATCTTGATTCTGATACAGCCATTTCAATTGCTGAGGAGATGGTTGAAAATCTGGATCTCACTGCCGAGGACTTGAGTGTTATTGCTGAACTAATACACACCATGACTGTCAGGCTGGTTCCTAACTGGAGAGCGTCGGGTCAACAATCATCATCTGGAGCAGATTGTTTGGGGGGCCATTCTCATGTAGTTTTAAATGGGGGATCATCTTCAAGGTGCAGTGTAGAGGATCTTGTTAACTCACAGGTTCTTGATGAAGATCAAGAGAAACATGATTCAATTATGTCAGGCATTTCAGCGGAGGATGAGATTACGGTCGTCTCAGATGCTAAAAACTTACAAGGTGATTATACACTCTTTGATGGATTCTGTGAGGGCCCCATTGTCAAAAGGTCCAAGTCAGATGTCAGGTTATATGATCAAGATGAACTCAATAGGGAAGTTAATGGCGGTGGATCTGTTAACAGCAATGGGTCTGATAGGAACTCAGTGAACGTCGTTTCAGAGAACTCAACTGTCTCATTTATAGATTCATTTGGCGATGAGACCAAGAATTTTCACATGTCAAGCATTAATTCTCTTTCTCTCGCAGACAAGGATCAATGTGACGAGCTGCAACTGGAGCTTGATGAAATAAATACACAGTTCCTCCAATGCTTTCTTGAACTTGCCAAGACGAGGGAGGATGCAATAGAAAACGCAAAAAGGAGATGGATTACAAGGAAGAAAATACCAGTGATGTGA 1911 0.4129 MDSGVGLSVGKFENDDADVVEKDPNGRYIRYGDMLGRGAFKTVYKAFDEVDGIEVAWNQVNIEDVLQSPQQLERLYSEVHLLKSLKHENIIKLHNSWVDDTNKTINMITELFISGSLRRYRRVHKNVELKAIKNWARQILQGLCYLHSHNPPITHRDLKCDNIFINGNTGEVKIGDLGLATVLRQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMITCEYPYSECKNHAQMYKKVTSGIKPAALGKVNDPQVKQFIEKCLVPASKRLPASELLKDPFLATDNIKEINHALQLPNRMTELVTPPTIEPRPMEIDQTIKDNLPGSCLEVTEETPQILTLDFLRKDKGNEFRLRGEKNASDRTISLNLRIVEANGHARNIHFPFYLDSDTAISIAEEMVENLDLTAEDLSVIAELIHTMTVRLVPNWRASGQQSSSGADCLGGHSHVVLNGGSSSRCSVEDLVNSQVLDEDQEKHDSIMSGISAEDEITVVSDAKNLQGDYTLFDGFCEGPIVKRSKSDVRLYDQDELNREVNGGGSVNSNGSDRNSVNVVSENSTVSFIDSFGDETKNFHMSSINSLSLADKDQCDELQLELDEINTQFLQCFLELAKTREDAIENAKRRWITRKKIPVM 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0808 636 Gene3D - 367 444 - -
Lele52g0808 636 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0808 636 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Lele52g0808 636 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
Lele52g0808 636 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 369 423 IPR024678 GO:0004674|GO:0005524
Lele52g0808 636 Gene3D Transferase(Phosphotransferase) domain 1 113 294 - -
Lele52g0808 636 Pfam Protein kinase domain 33 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0808 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Lele52g0808 636 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Lele52g0808 636 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0808 636 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 534 - -
Lele52g0808 636 SUPERFAMILY Protein kinase-like (PK-like) 25 306 IPR011009 -
Lele52g0808 636 CDD STKc_WNK 27 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0808 Lele-ChrLele52 5128916 5131690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0808 1 635 MAP Kinase Kinase Kinase AT5G41990 52.830 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele52g0808 Pkinase 2e-51 CL0016