Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0806 ATGGGTTCTTCGTCGCTTTGGAATAGTCTCAAATGTCTTTGTTCTGCTCATGGTTGGTCTTACGCCATTTTCTGGCGCTCTCATCCTCCTAATTCCCTGTTCCTGTCTGTGGAAGATGCTTACTTCGAAGGGAAAATAGGACAAGAAGTTACTAAGACGATTCCACAGCTTCATTTCCTGGGTGAAGGAATTGTTGGTCAAGTTGCTTTTACCGGCAAGCCCAGATGGATTTTCTCAGATTCTCAAACCCAGGAATGGAATCTAACAGGTGTCTTTGGAGATCATTGTGAGCTTGATTCTGACTTGCGTCAACAATTCTCCTCTGGGATCAAGACAATTGCTGTGATATCTGGTAAACCATTGGGAGTAGTACAATTTGGATCCACACAGAAGATCTTGGAAAGAGAGGAAATTCTGGAACAGACACAAAGATTGTTCATGGAGACTGACAGTTTGGATACGGTTGAGGCACCAGAAAATATGGTTTTACCTTGGGATTTTGAAAATTATGATCTGAATGGATTGTTGGCCTCTGATGAAAACTTGTGTGCTTGGAATCTCAACCCTGAAAATGACAATAACATCAATGAGGGAATGGGAAATGCTTGTTGTTTTTCAACAAGCATGGATAATTCTCTCCTTTCTACTTGTAAGAATCAGGAAGATGGGATCATCACCAGCTTGCATGGCGAATCTTCTTGTCTTAGCGATCAATTGACAGACAGTTTTGAGGTTCTTTTGAATCCTAACTCTTACGTGAAAAACCCATCATGTTTTGGCTCACAGAGCAGTGAAGTTTCTTTGGCTTCATCAATGGCTCAAGATTTTACCGCTGAGGATTCCGTTTTGACCTCTTTGTACAGCATGAACACAAGCATGCTTGAATCAGGAGGGTCATTTCAAGACAAATTAGGGATCAATTCTCTGGAATACAACCCTTTTGCTCAATCACTACATGGACTGTCAAAGATGTCGACCGAAGATTTATCCGAGTTTTGCTCTGTGGATGATCTTTGTCAGAAGTTTGCTTCTTCTCCAGAACATAGCACCTGTGCAACAAACACTGCATTTGAAAATTCTCTTTCTCAATCATTAGAACTCAATCCCACTTGTGCTGCCTTATTAAGGGATGATCCACTAAAAAATCTCTCAGATGGACCCCAAACATCTACCTTAATGCATGCTTTTGGTGGTGAGTGCTGGGGGAATATGAATATGATTGCACCAATGGTGGAATCTGCAACCAATACTGCTTCATCTGAATGCAAATCAGAGTTGAATACTGTTACACCTAATGGCACCAAGAAGGGATTATTTGCAGAGCTTGGCATTGAAGAGCTTTTGAATGGTGGATCCCGTAGTTTTGAGAATCAAATTTCTACTACTAAAAGGCGTAGGACAGATTCTTCATCTGGGAGTACTAATCCTGTTTCAAACTTGGACAAGACAAACAATCTTGTACACAAGAAAGACATATTTCCTGATTCAGTGGTAGGGCCATGGATGGACCATAGTCATTACCTCAATGCTGTTAAGGTTGTCCCTCAAAAGCCAGAGGAATCCACAAAGGTCTCAAGGAAGAGGGCTAGGCCTGGAGAGAGTACTCGACCCCGACCGAAAGATCGCCAGCTGATCCAAGACCGTATTAAAGAGTTGAGAGGAATAATACCTAGTGGTGGAAAGTGTAGCATTGACTCTTTGTTGGATCGCACCATCAAATACATGGTTTTCTTACAAAGCGTCTCAAAATATGCAGACAAGCTGCAAGAACCCAAAAGTCCTAAGCTCATAGAGGAGGCAAACAATATGGTTGCAAAAAACAAAAGTGTGGGAGAATCTGATATCAAGGGTGGTGGTGGTGGTTTTACATGGGCATTTGAAGTTGCAGGTCAAAAAATGGCATGCCCAATTATAGTAGAGGACATGAACCAACCAGGCCAAATGCTCATAGAGATGCTTTGTGAGGAGCAGGGCTTGTTCCTCGAGATAGCCGAAATAATCCGCGGATTTGGACTGAATATTCTGAAAGGGAAGATGGAAATCAGGGACAACAAGTTATGGGGACGCTTCATTGTTGAGGCAAGCAGACATGTAACGAGGATTGATGTATTCTGGTATCTGGTTCAGCTTCTACCTCAGACGAGTGCTTCTTCTGGAATGGATAATTATCAGAAAACAGATATGGCACTTCCTGCTGTGGCCATGACGTGA 2211 0.4233 MGSSSLWNSLKCLCSAHGWSYAIFWRSHPPNSLFLSVEDAYFEGKIGQEVTKTIPQLHFLGEGIVGQVAFTGKPRWIFSDSQTQEWNLTGVFGDHCELDSDLRQQFSSGIKTIAVISGKPLGVVQFGSTQKILEREEILEQTQRLFMETDSLDTVEAPENMVLPWDFENYDLNGLLASDENLCAWNLNPENDNNINEGMGNACCFSTSMDNSLLSTCKNQEDGIITSLHGESSCLSDQLTDSFEVLLNPNSYVKNPSCFGSQSSEVSLASSMAQDFTAEDSVLTSLYSMNTSMLESGGSFQDKLGINSLEYNPFAQSLHGLSKMSTEDLSEFCSVDDLCQKFASSPEHSTCATNTAFENSLSQSLELNPTCAALLRDDPLKNLSDGPQTSTLMHAFGGECWGNMNMIAPMVESATNTASSECKSELNTVTPNGTKKGLFAELGIEELLNGGSRSFENQISTTKRRRTDSSSGSTNPVSNLDKTNNLVHKKDIFPDSVVGPWMDHSHYLNAVKVVPQKPEESTKVSRKRARPGESTRPRPKDRQLIQDRIKELRGIIPSGGKCSIDSLLDRTIKYMVFLQSVSKYADKLQEPKSPKLIEEANNMVAKNKSVGESDIKGGGGGFTWAFEVAGQKMACPIIVEDMNQPGQMLIEMLCEEQGLFLEIAEIIRGFGLNILKGKMEIRDNKLWGRFIVEASRHVTRIDVFWYLVQLLPQTSASSGMDNYQKTDMALPAVAMT 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0806 736 MobiDBLite consensus disorder prediction 455 483 - -
Lele52g0806 736 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 529 578 IPR011598 GO:0046983
Lele52g0806 736 MobiDBLite consensus disorder prediction 512 542 - -
Lele52g0806 736 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 5 724 IPR043561 GO:0003700|GO:0006355
Lele52g0806 736 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 542 584 IPR036638 GO:0046983
Lele52g0806 736 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 47 IPR025610 -
Lele52g0806 736 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 54 146 IPR025610 -
Lele52g0806 736 MobiDBLite consensus disorder prediction 519 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0806 Lele-ChrLele52 5116443 5119627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0806 469 734 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 46.454 6.93e-67 231