Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0803 ATGGCTGTTTTCAAGGAAGAAGCCAATCGCCGGCTTCGCAGAATTCAGACCTTCTCTGACTCTTTTAAGTTGTTAAACATGTCTGCTTCTCGCATTTCAGCTTTCGTAGAATCTTCACCCGCTTGTTCTTTGGACCCAGCCCTCGTGAAGCCCTCAACCCCACTTGTCTCCTTCCTCGAACGTCTACAGGAAACGGCTTTAGCCACTTTGGGCAAATCTAAATTCGATCCAAAAACATATGTGGACTTGCCCTTGAAGTTCAACTTGTCTGAGACAGAGGAGGCATTTGATAAGCTTGCTAGGTCTGCGAATGGCTCTGTACCAGTCGATGAGTTGAATGATTTTATAGAAAGATACTTTGATGATGCAGGGGACGATGTGGTGTACTACGAACCAGATGATTACGTAGATGAGCCAGAAGGATTCTTGCCCAAAGTTGAGCATCCAGAGGTGAGGGCATTGGCATTGAAGGTCCATTCCCTTTGGAAAAACTTGAGTCGCAGAGTATCAAATGGGGTCAAAAGCCATCCCCATTTGCATACTCTTCTTCCTCTCCCTGCTTCTTTCGTCATTCCTGGTTCACGCTTTCGTGAGGTTTATTATTGGGATTCCTACTGGGTGATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCACGGCAGTCGTGACTAATCTTATTTCTTTCATAGAGGAATATGGATTTGTGCTTAATGGTGCAAGAGCCTACTACACCAACAGAAGCCAACCTCCCCTTTTAAGTTCTATGATTTATGAGATTTACAATAGAACTGGTGACATAGAATTGGTCAAAAAATCGCTTCCTGCGCTGAGGAAAGAATATGAATTTTGGAATTCAGACATACATAGGGTGACCATTGTGGATACTCAAGGTTGGGCTCACACCTTAAATCGTTATTATGCAATGTGGAATAAACCTAGGCCAGAGTCTTCAATAAACGACAAGGCACTTGCTTCCAAGCTTTTGAATGTTTCAGAAAAACAGCACTTTTATCGTCAAGTGGCTTCAGCTGCTGAATCAGGATGGGATTTTAGTACAAGATGGATGAGAGATCCGTCAGATTTTACCACATTGGCTACAACAGCAGTAATACCTGTTGATCTAAATGCTTATATACTTGGGATGGAACTTAATATTGCATTTTTCGCTGAAGTTACTGGAGATAATAGTACGGCTCAGTACTTCCTGCAACTAGTTGATAATAGAAAGAAGGCATTCAACTCAGTTTTTTGGAGCAAAAACATGAATCAATGGCTTGATTTCTGGCTCACAAATAGGACATGTCAGGAAGCTCAAGTCTGGGATGCTCACCAGCAGAATCAAAATGCATTTGCTTCCAATTTTGTTCCTTTGTGGATGGAACCATTTTACTCAGACTCTTCGGTTGTGGGTGGCGTTGTTGAAAGCCTCAAAACTAGTGGGCTACTTCATGCTGCTGGAATTGCAACCTCTTTGACGAATTCTGGACAACAGTGGGACTTCCCAAATGGCTGGGGCCCACTTCAACATATGATAGTAGAAGGTCTGGTGAAATCTGGGTTGAAAGAAGCAGCTTCATTAGCTGAAGAAATTGCAAGGAGATGGATCACAACCAACTATGTCGCCTATAAGAAATCGGGGGTGGTGCATGAAAAATATGATGTGGAGCATTGTGGAGAGTTTGGGGGTGGTGGGGAATATGTACCTCAGACTGGTTTTGGGTGGTCGAACGGAGTGGTGCTTGCACTCTTGGAGGAGTTTGGATGGCCTCAGCACCTCAATATTGACTGTTCATATATTTCCTCAGAGATTAATGGCATTGGCATTGGCAATGGCAATTGA 1845 0.4347 MAVFKEEANRRLRRIQTFSDSFKLLNMSASRISAFVESSPACSLDPALVKPSTPLVSFLERLQETALATLGKSKFDPKTYVDLPLKFNLSETEEAFDKLARSANGSVPVDELNDFIERYFDDAGDDVVYYEPDDYVDEPEGFLPKVEHPEVRALALKVHSLWKNLSRRVSNGVKSHPHLHTLLPLPASFVIPGSRFREVYYWDSYWVIRGLLVSKMYKTATAVVTNLISFIEEYGFVLNGARAYYTNRSQPPLLSSMIYEIYNRTGDIELVKKSLPALRKEYEFWNSDIHRVTIVDTQGWAHTLNRYYAMWNKPRPESSINDKALASKLLNVSEKQHFYRQVASAAESGWDFSTRWMRDPSDFTTLATTAVIPVDLNAYILGMELNIAFFAEVTGDNSTAQYFLQLVDNRKKAFNSVFWSKNMNQWLDFWLTNRTCQEAQVWDAHQQNQNAFASNFVPLWMEPFYSDSSVVGGVVESLKTSGLLHAAGIATSLTNSGQQWDFPNGWGPLQHMIVEGLVKSGLKEAASLAEEIARRWITTNYVAYKKSGVVHEKYDVEHCGEFGGGGEYVPQTGFGWSNGVVLALLEEFGWPQHLNIDCSYISSEINGIGIGNGN 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0803 614 Pfam Trehalase 75 589 IPR001661 GO:0004555|GO:0005991
Lele52g0803 614 PRINTS Glycosyl hydrolase family 37 signature 234 252 IPR001661 GO:0004555|GO:0005991
Lele52g0803 614 PRINTS Glycosyl hydrolase family 37 signature 304 321 IPR001661 GO:0004555|GO:0005991
Lele52g0803 614 PRINTS Glycosyl hydrolase family 37 signature 492 508 IPR001661 GO:0004555|GO:0005991
Lele52g0803 614 PRINTS Glycosyl hydrolase family 37 signature 371 388 IPR001661 GO:0004555|GO:0005991
Lele52g0803 614 PRINTS Glycosyl hydrolase family 37 signature 414 430 IPR001661 GO:0004555|GO:0005991
Lele52g0803 614 PRINTS Glycosyl hydrolase family 37 signature 339 356 IPR001661 GO:0004555|GO:0005991
Lele52g0803 614 PRINTS Glycosyl hydrolase family 37 signature 572 585 IPR001661 GO:0004555|GO:0005991
Lele52g0803 614 SUPERFAMILY Six-hairpin glycosidases 72 591 IPR008928 GO:0005975
Lele52g0803 614 Gene3D - 61 598 IPR012341 GO:0005975
Lele52g0803 614 PANTHER TREHALASE 50 598 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0803 Lele-ChrLele52 5090540 5094870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0803 45 598 Trehalose Biosynthesis Gene Families AT4G24040 58.602 0.0 666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0803 52 5090540 5094870 Lele52g0803 52 5090540 5094870 ECH
Lele49g0776 49 4709494 4713342 Lele52g0803 52 5090540 5094870 hybridization
Lele50g0815 50 5029676 5033503 Lele52g0803 52 5090540 5094870 hybridization