Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0791 ATGAGTGTCCCTCAAACCCCAACCACATCTCCAAATTTGTATCCACAAGAACTTCAGTTAAAACTATACCAGGCCTTCTTTTTCTCAATTCCAATCCTATTTTCAATCATTCTGTTTCTCTTGTTTTATCTATTCTACCTCAAGCGCAGGTCTTCTTTCTCTTCCCCTCCTCACTCTCTTCCTACTACTGCACCTTCAACTACCTCTCATTCCACTCCTTGTCGTTTGGATCTCACTCTTCAGTTCCTTGACACTCTTCCGAAAGTTCTATTTGATGAAGAATTGGAAGCAAGAGATTCACAATGTTGTATATGTCTGGGAGAATTTGAGATAAAGGAAGAGGTATTGCAGATTCCTGAGTGCAAGCATGTATTTCACAGAGAATGCATTTACCACTGGCTTCATTCACACACCACTTGTCCATTGTGTAGATGTTGTATCATCCCTCCCACCAAGTTTCTGAATCCTCCTCCTCCTCCTCTTGCAGATGAAGCTGCTTCTTCTTCTTCAATCTAA 516 0.4128 MSVPQTPTTSPNLYPQELQLKLYQAFFFSIPILFSIILFLLFYLFYLKRRSSFSSPPHSLPTTAPSTTSHSTPCRLDLTLQFLDTLPKVLFDEELEARDSQCCICLGEFEIKEEVLQIPECKHVFHRECIYHWLHSHTTCPLCRCCIIPPTKFLNPPPPPLADEAASSSSI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0791 171 Pfam Ring finger domain 101 144 IPR001841 -
Lele52g0791 171 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Lele52g0791 171 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 15 158 - -
Lele52g0791 171 SUPERFAMILY RING/U-box 80 154 - -
Lele52g0791 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 149 IPR013083 -
Lele52g0791 171 SMART ring_2 102 143 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0791 Lele-ChrLele52 5012731 5014331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0791 8 149 C3H Transcription Factor Family AT4G10150 40.690 1.10e-36 125