Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0759 ATGGAGGGATTTCACGAGAGAGGTGCTCATCAGCTTGAACCGCATAACATTGCTGATATAGGGTCATCCCTGTCAAATCTGATATTATCCGGTGGGACGAACCCTTTGGATTCTATTTTCTCTCACTGCCCTCAAACAAACGCCACAAATAACCCCATGTTCGAGGCCCTAGCAGGATCGTGCGCTTTTGAACCTCTGGGCTCGTCGGTATACCTTCGTCAACGAGACATTCTGCAGAAATTCTACGAGGATAGCCGAGTGAGTACGTCATTTGGCGGTTTATCAACGACAAATCAACGTCTAAACTATGCCGGAGCAACATCATCGTACTCATACATGAACAACCCCCGCAAGAAAAAGCTATACAGGGGAGTGAGACAGAGACAATGGGGAAAATGGGTTGCAGAAATCAGACTTCCTCAGAACAGAATGAGAGTGTGGTTAGGCACTTATGAAACTGCCGAGGCTGCTGCTTATGCTTACGATCGTGCGGCTTATAAGCTCCGAGGCGAATATGCTCGTTTGAATTTCCCGAATCTAAAGGACCCCAGTAAGTTAGGATTCGGAGATGGCTCCAGATTAAATGGTTTGAAAACCTCCGTAGATGCTAAAATTCAGGCTATCTGTCAAAAGGTGAAGAGGGAGAAAGCCAAGAAGAAGAGTAGCGCTAAGAAGCGTAATCCAATTCCCAGTCCAGAACAGGGTGAGAAATCACACGAGATTGAGTCTTATTCTTGTTCATCATCCTCGCTACCCTTATCTCCATTAGTTTTTGACGATAATTGGACAAACGAGTTCATTTCACCGTCGATTTCAGAAGACGGAATATGGAAGGGCGACAACTCGCCGTCAACGGTCTCAACTGATTTTCCGAAAATTTTACCAGAGGAACCAGAATTCGAAGGTTGTTCGCTGGCAAGGATGCCTTCCTTCGATCCCGAGTTAATCTGGGAAACTTTTAAAGAAAAGGAACACGGTACTTCCAAGCGAAGTTCTGTTCCATCCTGCAAACAAGCAAGATCTTTGCAGTTTGGCTTTGATGATTATTTATTAACAAGTCAGAGCAGTGAACTAAACTTTGGCTACTCTGAACTCAGCTCCCTCTTGCCAGTTCCAATAAATAGCTGCTTCTACACTCCGCTGTTTCCCTCGGAATCCAATTCTCCCCCTCCCCCTCTCGCTTTCTCTTCCGCGTCGGCTGAAGTGATAACCTGCTCCAATATAGTGCCGCGGAGATCAATCGAACCACCGCTAAATGGGAGTCGGCGATTTCCAGCTGACGGTGCTTTCAATTTTGTGATCCTATTTGTCACCATATTGGCCCCACATGACTCACCTAACACCGATGGAATTGATCCAGATTCTAGTTCGAATGTGTGCATAGAGGACTCATACATATCTTGTGGAGATGATGCTGTGGCTGTGAAGAGTGGGTGGGATGAATATGGGATTGCATTGCTTATGGTAGACCTAGCTCCGGCAACACCATCCGGCGGATTTGCCTCTCTGAAATCTACCTTCAAGCGTCAAGGTATTACCGGTCCTAGATCTCCTCCATGGCAGTGTTCTAATGTTCTTGGAGCATCTCGTCAGGTAAGTCCGTCTCCATGTTCAGAGCTGGGACACCCAGCAGCCTGGATCATGTTCAAATCACTTCTGAGAAGTGCTGCAAAAACTTGCGGATGCTCTTCATCAAGGCACCATCCTCGTGATCTCTTTCGTCGTGGTGGTGATCGTGTTTGTGATCATGTTCGTGGTCGTGGTGGTGATCGTGGTCATCGTGATCGTGATCGTGATCGTGTTCGTGGCGATGGTGAGGGTGACGAGGTTCGTCGGTGA 1839 0.472 MEGFHERGAHQLEPHNIADIGSSLSNLILSGGTNPLDSIFSHCPQTNATNNPMFEALAGSCAFEPLGSSVYLRQRDILQKFYEDSRVSTSFGGLSTTNQRLNYAGATSSYSYMNNPRKKKLYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDGSRLNGLKTSVDAKIQAICQKVKREKAKKKSSAKKRNPIPSPEQGEKSHEIESYSCSSSSLPLSPLVFDDNWTNEFISPSISEDGIWKGDNSPSTVSTDFPKILPEEPEFEGCSLARMPSFDPELIWETFKEKEHGTSKRSSVPSCKQARSLQFGFDDYLLTSQSSELNFGYSELSSLLPVPINSCFYTPLFPSESNSPPPPLAFSSASAEVITCSNIVPRRSIEPPLNGSRRFPADGAFNFVILFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISCGDDAVAVKSGWDEYGIALLMVDLAPATPSGGFASLKSTFKRQGITGPRSPPWQCSNVLGASRQVSPSPCSELGHPAAWIMFKSLLRSAAKTCGCSSSRHHPRDLFRRGGDRVCDHVRGRGGDRGHRDRDRDRVRGDGEGDEVRR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0759 612 Pfam Glycosyl hydrolases family 28 429 480 IPR000743 GO:0004650|GO:0005975
Lele52g0759 612 ProSiteProfiles AP2/ERF domain profile. 121 178 IPR001471 GO:0003700|GO:0006355
Lele52g0759 612 CDD AP2 120 180 IPR001471 GO:0003700|GO:0006355
Lele52g0759 612 MobiDBLite consensus disorder prediction 213 242 - -
Lele52g0759 612 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 47 320 - -
Lele52g0759 612 FunFam Ethylene-responsive transcription factor 2 120 179 - -
Lele52g0759 612 SUPERFAMILY Pectin lyase-like 427 480 IPR011050 -
Lele52g0759 612 SMART rav1_2 121 184 IPR001471 GO:0003700|GO:0006355
Lele52g0759 612 Gene3D - 424 502 IPR012334 -
Lele52g0759 612 MobiDBLite consensus disorder prediction 584 612 - -
Lele52g0759 612 Pfam AP2 domain 122 171 IPR001471 GO:0003700|GO:0006355
Lele52g0759 612 Gene3D AP2/ERF domain 121 179 IPR036955 GO:0003700|GO:0006355
Lele52g0759 612 PRINTS Ethylene responsive element binding protein signature 144 160 IPR001471 GO:0003700|GO:0006355
Lele52g0759 612 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
Lele52g0759 612 SUPERFAMILY DNA-binding domain 121 178 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0759 Lele-ChrLele52 4788228 4797029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0759 17 320 AP2-EREBP Transcription Factor Family AT1G64380 44.838 1.63e-58 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele52g0759 Glyco_hydro_28 2.9e-11 CL0268