Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0754 ATGGAGGACGACAGGAGGTGGGAGCCGAGCACACTTAAGAATGAGCTTCTTCAAGGAATGGAGGCGGCGAGGAAGTTGATGGCAGATTTTAGGACAGAATCTTCGGCAGAGACCAGGGATTTGCTGGTACAGAGGATATTATCATCTTATGAGAAGGCTCTGCTAATTCTGAAATGGAATGCATCTAATATTAACCCTCTTCCAACGGGGACGGTAACATTACCTAGTTTGCCGCCAGAGTCTCCGATATCTGTCAATGCAAGTCCTTTCAGAGATGACAATGATGGGGATCATCCAGAGCTTAAACCCGATTCCAAGAAAAGAAAGATGATGCCCACATGGATGGAACAAGTAAGATCGAGCTCTGAGACTGCCCTTGAAGGACCCCAAGATGATGGCTTCAGCTGGAGAAAATATGGACAGAAAGACATTCTGGGTGCAAAATATCCTAGAAGTTACTATAGGTGCACCCTCCGCAAGACTCAGAACTGCTGGGCCACGAAGCAAATACAAAGATCAGATGAAGACCCTACTGTATTTGACGTCACTTACCGAGGAAGGCATACTTGTTCCCTGGGAAATAATGCTGTTCAACCACCTAAGTCTCCAGACAAACGGGAGAAAATGCATAATTATGAAACTGACATCCGCCATCACGAGCCCTTACAAGAGAGCCTAATGAAATTCAGAAATAACTTGAGTGTCAATACAGAAAACCTTGAAAACGAGGAGATGGCAAATCCTTTTGCTTTCCTTTCAACTACCTCTGGATACATGACACCAGAAAGCCACAGCTTAACTCCCTTGGCAATAGAGAATGATCCATTCTGGGGGAACCTTTCACAAACAGACTTGCTATCTCCAAACACGCCACAACCGCACTATTTACCATCTCTGTCTTTCAAGATCGATGAGTTCCATGGCATCAAAAACCAGCCATGCTCAGAATCTGACATTACTGAGATCATTTCAGCTAACACATCAGCCAGCAATTCTCCAATTCTGGATTTTAATTTCCCTATTGATCCGGTGGAAATTGATCCAAATTTCCCTTTCGACACCCCGGGGCTTTTCCCATGA 1080 0.4472 MEDDRRWEPSTLKNELLQGMEAARKLMADFRTESSAETRDLLVQRILSSYEKALLILKWNASNINPLPTGTVTLPSLPPESPISVNASPFRDDNDGDHPELKPDSKKRKMMPTWMEQVRSSSETALEGPQDDGFSWRKYGQKDILGAKYPRSYYRCTLRKTQNCWATKQIQRSDEDPTVFDVTYRGRHTCSLGNNAVQPPKSPDKREKMHNYETDIRHHEPLQESLMKFRNNLSVNTENLENEEMANPFAFLSTTSGYMTPESHSLTPLAIENDPFWGNLSQTDLLSPNTPQPHYLPSLSFKIDEFHGIKNQPCSESDITEIISANTSASNSPILDFNFPIDPVEIDPNFPFDTPGLFP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0754 359 MobiDBLite consensus disorder prediction 72 114 - -
Lele52g0754 359 Gene3D WRKY domain 115 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele52g0754 359 SUPERFAMILY WRKY DNA-binding domain 129 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele52g0754 359 Pfam WRKY DNA -binding domain 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele52g0754 359 ProSiteProfiles WRKY domain profile. 125 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele52g0754 359 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele52g0754 359 MobiDBLite consensus disorder prediction 91 113 - -
Lele52g0754 359 FunFam WRKY transcription factor 53 116 193 - -
Lele52g0754 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 267 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0754 Lele-ChrLele52 4766013 4767272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0754 7 242 WRKY Transcription Factor Family AT4G23810 48.276 1.45e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele52g0754 WRKY 5.3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0726 49 4423104 4424360 Lele52g0754 52 4766013 4767272 hybridization
Lele50g0766 50 4721822 4723024 Lele52g0754 52 4766013 4767272 hybridization