Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0739 ATGGCATTTCTACGCATTTGCTATTCCATTTGCCTACTGGATCTGATTCTCCGGCAAGGAAATGCAGAGCCGGTTGAAGATAAGCGAGCTTTGCTTGATTTTGTGAGCCAGTTCTCTCACTCTCGCCCTCTAAATTGGAATGAGAGCTCTTCAGTGTGTACTAATTGGACTGGAGTCACTTGTAACGAAGATAAGTCCCGAGTAATAGCCGTTCGGCTGCCGGGAATTGGATTTCATGGAGCAATTCCGCCCAACACAATTAGCCGCCTCTCAGCGCTGCAAATCGTGAGCCTCAGATCCAATTTTATCAGTGGGAGTTTCCCTTCTGATTTTTCTGAGTTAAAAAACCTGTCTGTGCTGTATCTTCAATTTAACAACCTTTCGGGTTCTTTACCGGAGTTCTCAGTCTGGAAGAATCTTACCATTGTCAACTTGTCCAATAATCGTTTCAATGGCAGCATTCCCTTCTCAATTTCTAATTTGACTGAGCTTGCTGGTTTGAATCTGGCAAACAACTCGCTTTCTGGTGAAATTCCTGATATCCAATTGCCCAGATTGCAACAGCTGAATTTGTCTAACAACAAGTTGAACGGTAGTGTGCCTAATTCTCTCCAGAGGTTTCCTATGACATCATTCCTCGGTAATAATATATCTTTTGGAAATGATCCTCACCTTTCTCCTGTACTTCCTCCTTCTTCCAAACCATCTTCAAAATCCAAGAAGCATGGAGGTCTCAGTGAAGCTGCACTACTAGGAGTTTCGGTTGCTGCTGGTGTGCTTGCTCTTTTAGCATTTGGTTTTCTGATGTTTGTATGCTTCTCAAGAAGGAGGGACGAAGATGGGTTCTCTGGGAAGTTGCAGAAGGGAGGAATGTCTCCAGAGAAAGAAGTTTCTAGAAATCAAGATGCGAATAATAGACTTGTTTTCTTTGAGGGATGTAACTATGCCTTTGACTTGGAGGATTTGTTAAGGGCTTCTGCTGAGGTACTGGGCAAGGGAACATTTGGCACTGCATACAAGGCCATACTAGAGGATGCTTCCACGGTCGTCGTAAAGAGGCTGAAGGATGTAGCTGTTGGAAAAAAAGACTTTGAGCAACACATGAAGATTGTGGGAAGTCTTAAACATGATAATGTGGTTGAACTGAAAGCATATTTCTATTCCAAGGATGAGAAATTGATGGTGTATGATTATTACATTCAGGGGAGCCTCTCTTCTTTACTGCATGGTAAAAGAGGAGAGGATAGGGTGGCTTTAGATTGGGATTGTCGGCTTAAAATAGCACTAGGTGCTGCAAGGGGGATTGCACGTATCCATGCAGAGAACGGTGGAAAGATGGTGCATGGAAACATCAAATCTTCAAATATCTTTGTCAACTCTAAGCAATATGGTTGTGTGTCTGATCTTGGGTTGGCCATGATAATGAGCTCACTAGCCCTCCCCATCTCACGCGCTTCTGGCTATCGAGCACCCGAAGTTACAGACACCAGAAAAGCAGCACAGCCTTCAGATATTTACTGTTTTGGAGTGGTGTTACTGGAGCTTCTCACTGGGAAATCCCCCATACTTACTACAGGTGGGGATGAGATTGTCCACCTGGTGAGGTGGGTGCATTCAGTTGTGCGAGAGGAGTGGACAGCTGAAGTGTTTGATCTGGAACTCATGAGATATCCAAATATAGAAGAAGAGATGGTGGAGATGTTGCAGATAGCCATGGCGTGCGTGGCAAGGATGCCAGATCAGAGACCGAATATTTCGGATGTTGTAAAGATGATAGAAAATGTGAGACAAGTTGATATGGAGAATCGTCCAACACCACCTGAGAGCCAAGCTGAAAGTGGAACGCCAACGTCAGTGTTAGGCTTTAATAGTCTCATTCAGATCATGGTCGCTAAGGCCATGATTCCTAGGATTGAATTGGATCTGAAAGGATTTTATTGGGTGATGGCCTCCAAGCGGATTTTGAAGGAGCTCAAGGATCTCCAGAAGGATCCTCCTACTTCTTGCAGCGCTGGCCCAGTGGCTGAAGACATGTTTCATTGGCAAGCTACAATTATGGGTCCTCCTGACAGTCCATATGCTGGTGGAGTATTTCTTGTCACCATCCATTTTCCTCCAGATTATCCATTCAAACCGCCGAAGGTTGCATTCAGGACCAAGGTCTTTCACCCCAACATCAATAGCAATGGGAGCATCTGCCTTGACATATTGAAGGAGCAATGGAGCCCCGCACTAACAATTTCAAAGGTTTTGCTCTCGATCTGCTCCCTCTTGACAGATCCTAATCCTGATGATCCTCTGGTGCCTGAGATTGCTCACATGTACAAGACTGACAAGAGCAAGTACGAATCAACGGCCAGAAGCTGGACCCAGAAGTATGCTATGGGCTAG 2391 0.4496 MAFLRICYSICLLDLILRQGNAEPVEDKRALLDFVSQFSHSRPLNWNESSSVCTNWTGVTCNEDKSRVIAVRLPGIGFHGAIPPNTISRLSALQIVSLRSNFISGSFPSDFSELKNLSVLYLQFNNLSGSLPEFSVWKNLTIVNLSNNRFNGSIPFSISNLTELAGLNLANNSLSGEIPDIQLPRLQQLNLSNNKLNGSVPNSLQRFPMTSFLGNNISFGNDPHLSPVLPPSSKPSSKSKKHGGLSEAALLGVSVAAGVLALLAFGFLMFVCFSRRRDEDGFSGKLQKGGMSPEKEVSRNQDANNRLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDASTVVVKRLKDVAVGKKDFEQHMKIVGSLKHDNVVELKAYFYSKDEKLMVYDYYIQGSLSSLLHGKRGEDRVALDWDCRLKIALGAARGIARIHAENGGKMVHGNIKSSNIFVNSKQYGCVSDLGLAMIMSSLALPISRASGYRAPEVTDTRKAAQPSDIYCFGVVLLELLTGKSPILTTGGDEIVHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMACVARMPDQRPNISDVVKMIENVRQVDMENRPTPPESQAESGTPTSVLGFNSLIQIMVAKAMIPRIELDLKGFYWVMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKSKYESTARSWTQKYAMG 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0739 796 Gene3D Phosphorylase Kinase; domain 1 291 398 - -
Lele52g0739 796 SMART ubc_7 652 795 - -
Lele52g0739 796 FunFam pollen receptor-like kinase 1 293 398 - -
Lele52g0739 796 FunFam Ubiquitin-conjugating enzyme 28, E2 649 796 - -
Lele52g0739 796 Gene3D Ribonuclease Inhibitor 136 226 IPR032675 -
Lele52g0739 796 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Lele52g0739 796 ProSiteProfiles Protein kinase domain profile. 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0739 796 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 722 737 IPR023313 -
Lele52g0739 796 Gene3D Transferase(Phosphotransferase) domain 1 400 611 - -
Lele52g0739 796 SUPERFAMILY Protein kinase-like (PK-like) 328 618 IPR011009 -
Lele52g0739 796 Gene3D Ubiquitin Conjugating Enzyme 647 796 IPR016135 -
Lele52g0739 796 PANTHER OS05G0588300 PROTEIN 12 604 - -
Lele52g0739 796 CDD UBCc 651 790 IPR000608 -
Lele52g0739 796 ProSitePatterns Protein kinases ATP-binding region signature. 330 361 IPR017441 GO:0005524
Lele52g0739 796 Pfam Ubiquitin-conjugating enzyme 653 789 IPR000608 -
Lele52g0739 796 SUPERFAMILY UBC-like 647 795 IPR016135 -
Lele52g0739 796 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Lele52g0739 796 Pfam Protein kinase domain 327 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0739 796 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Lele52g0739 796 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 605 - -
Lele52g0739 796 SUPERFAMILY L domain-like 38 207 - -
Lele52g0739 796 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 649 795 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0739 Lele-ChrLele52 4690569 4698562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0739 16 619 Receptor kinase-like Gene Family AT4G23740 64.630 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele52g0739 Pkinase 1.9e-33 CL0016