Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele52g0736 | ATGAACGACGCAGATGTCTCCAAGCAAATCCAGCAGATGGTGAGGTTTATACGCCAGGAAGCTGAGGAGAAAGCCAACGAGATCGCCGTCTCTGCTGAAGAAGAATTCAACATCGAGAAGTTACAGTTGGTTGAAGCTGAGAAAAAGAAGATCAGGCAAGAATACGAGCGCAAAGAGAAGCAAGTTGAAATTCGGAAAAAGATTGAGTATTCTATGCAGCTAAATACTTCTCGCATAAAAGTTCTTCAAGCTCAAGATGATGAGGTTAATTCCATGAAGGAAGCGGCAGCGAAGGAACTTTTGAACGTGAGTCATCATCACCATCACCATGTGTACAGACAGCTTCTGAAAGATCTTATTGTTCAGAGTTTGCTGAGACTGAAAGAGCCTTCTGTCCTTCTGCGATGTCGGAAAGAAGACCTGCATTTGGTGGAGCATGTGCTGGATTCAGCTGCACAGGAGTATGCTGATAAAGCAAATGTTCACCCACCAGAGATAATTGTTGACAATCAAGTCTATCTTCCTCCTGCGCCTAGCCCTCATAATACTCATGAAGCCTACTGTTCTGGAGGTGTAGTGTTGGCTTCTCGAGATGGGAAGATTGTGTGTGAAAATACCCTTGATGCTCGGCTGGATGTTGCATTTCGTAAAAAGCTTCCAGAGATCCGCAAGCAGCTCTTTGGACAAGTTGTTGCTTGA | 699 | 0.4464 | MNDADVSKQIQQMVRFIRQEAEEKANEIAVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNTSRIKVLQAQDDEVNSMKEAAAKELLNVSHHHHHHVYRQLLKDLIVQSLLRLKEPSVLLRCRKEDLHLVEHVLDSAAQEYADKANVHPPEIIVDNQVYLPPAPSPHNTHEAYCSGGVVLASRDGKIVCENTLDARLDVAFRKKLPEIRKQLFGQVVA | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele52g0736 | 232 | Gene3D | - | 1 | 62 | - | - | |
| Lele52g0736 | 232 | Gene3D | - | 92 | 230 | IPR038495 | - | |
| Lele52g0736 | 232 | SUPERFAMILY | V-type ATPase subunit E-like | 88 | 228 | - | - | |
| Lele52g0736 | 232 | PANTHER | ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED | 1 | 229 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 | |
| Lele52g0736 | 232 | Pfam | ATP synthase (E/31 kDa) subunit | 16 | 227 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 | |
| Lele52g0736 | 232 | Coils | Coil | 29 | 61 | - | - | |
| Lele52g0736 | 232 | Hamap | V-type proton ATPase subunit E [atpE]. | 8 | 228 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele52g0736 | Lele-ChrLele52 | 4666871 | 4669628 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele52g0736 | 1 | 232 | Primary Pumps ATPases(2) | AT4G11150 | 77.586 | 3.57e-129 | 362 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele52g0736 | 52 | 4666871 | 4669628 | Lele52g0736 | 52 | 4666871 | 4669628 | ECH | |
| Lele49g0713 | 49 | 4324625 | 4328175 | Lele52g0736 | 52 | 4666871 | 4669628 | hybridization | |
| Lele50g0750 | 50 | 4620501 | 4623240 | Lele52g0736 | 52 | 4666871 | 4669628 | hybridization |