Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0726 ATGCTTGAACTTGGCCACCTTGGAAAGCTTGTCCACTGCCTGAATCAAGCGGTCAAGCCTCGCCGCGAACTCAACCAGCGTGGAAGTGAAATTGCTGAGCGACAAGGCCGCAGTACTCTCCAACGCTCTCATTCTGGGCAACAAGTCCGAGGTTGTCCCGTAACCTCCGTCCAAGCCTTGTCTTTGCTTCTCATATTCTCTTCTAATCTTCTATGTGAAGAAAATGAACAGGGAATCTTTGATGCTATTCTTCGTGGACATATTGATTTTGTGTCAAAACCTTGGCCTTCTATATCAAGTAGCGCCAAAGATTTGGTTAGAAAGATGTTGCGAGCTGACCCCAGAGAACGGCTTTCAGCCGTTGGTGTCCTTAATCATCCTTGGATGAGAGAAGATGGGGACGCATCCGATAAGCCTCTTGACATTGCTGTTTTGACCAGAATGAAACAATTCCGAGCAACGAACAAACTAAAGAAAGTAGCTCTGAAGGTAATTGCAGAAAATCTTTCTGAAGAAGAAATCATTGGCTTGAAGGAGATGTTCAAATCAATGGACACAGATAACAGTGGAACTATCACTTTTGAAGAGTTGAAAGTTGGTCTCCCCAAATTGGGTAGTAAGCTTTCCGAATATGAAGTGAGGCAGTTGATGGAAGCGGTAAAATTTAGTTTGAAGTGA 678 0.441 MLELGHLGKLVHCLNQAVKPRRELNQRGSEIAERQGRSTLQRSHSGQQVRGCPVTSVQALSLLLIFSSNLLCEENEQGIFDAILRGHIDFVSKPWPSISSSAKDLVRKMLRADPRERLSAVGVLNHPWMREDGDASDKPLDIAVLTRMKQFRATNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKVGLPKLGSKLSEYEVRQLMEAVKFSLK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0726 225 CDD EFh 177 220 IPR002048 GO:0005509
Lele52g0726 225 ProSitePatterns EF-hand calcium-binding domain. 185 197 IPR018247 -
Lele52g0726 225 Gene3D Transferase(Phosphotransferase) domain 1 52 129 - -
Lele52g0726 225 Gene3D - 136 223 - -
Lele52g0726 225 ProSiteProfiles EF-hand calcium-binding domain profile. 172 207 IPR002048 GO:0005509
Lele52g0726 225 SMART efh_1 176 204 IPR002048 GO:0005509
Lele52g0726 225 MobiDBLite consensus disorder prediction 24 48 - -
Lele52g0726 225 MobiDBLite consensus disorder prediction 31 48 - -
Lele52g0726 225 SUPERFAMILY EF-hand 155 220 IPR011992 -
Lele52g0726 225 Pfam EF hand 177 202 IPR002048 GO:0005509
Lele52g0726 225 PANTHER SERINE/THREONINE-PROTEIN KINASE 70 218 - -
Lele52g0726 225 SUPERFAMILY Protein kinase-like (PK-like) 66 154 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0726 Lele-ChrLele52 4597113 4600471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0726 74 220 EF-hand Containing Proteins AT4G23650 76.190 6.01e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele52g0726 EF-hand_1 3.9e-08 CL0220