Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0713 ATGGACGATAACCTTCTCGACGATATTATCCGGAGGCTTATCTCGGCTAAGAACGGCAGAACGACGAAGCAGGTTCAGCTCACGGAGTCCGAAATCCGCCAGCTCTGTGTCTCTTCCAAGGAGGTCTTTCTCAGCCAGCCTAATCTTCTCGAACTCGAAGCACCGATTAAGATTTGTGGTTTTCATGAAACAGTGAACTTAAATGGTGACATGTTGGTTCCTTTAACTAGGCTTGGAGATGTTCATGGTCAGTTTTCAGATCTTTTAAGGTTGTTTGAGTATGGAGGATACCCACCAGAAGCCAATTATTTGTTTCTTGGTGATTATGTTGATCGTGGTAAGCAGAGCATAGAGACAATCTGTTTACTCCTTGCTTACAAGATCAAATACAAGGAGAACTTCTTTCTTCTCAGGGGAAACCACGAATGTGCTTCCATCAATCGTATATATGGATTTTATGATGAGTGCAAGAGGAGATTTAATGTTCGCCTCTGGAAGACATTTACAGACTGCTTTAATTGTTTGCCTGTTGCTGCGCTTATAGATGAGAAGATCCTTTGCATGCATGGTGGACTATCTCCTGATCTTAAAAATCTGGATCAGATTAGAAATATTGCTCGCCCTATTGATGTGCCTGATCAGGGCCTTCTCTATGACCTGCTCTGGGCTGATCCTGATAAAGATCTTGATGGCTGGGGAGAAAATGACCGGGGTGTTTCATTTACATTTGGAGCTGACAAGGTTGTTGAATTTCTTGAAAAACACGATCTTGATCTGATTTGCAGAGCTCACCAGGCTGAAGTCAAAGGGTATTCTGAAGAAGTGCAGAAGGTTTTGGATGAGTTTGAAGATGTTTTCAAGGAGCCACAAGTTGTTTGTTCCTCTGGCAACACTTCTAATGGGCTGGATTCTAGATTGAAGCTAAAGTACTTAAAGCTAGTGACCGTATTCTCTGCCCCAAATTACTGTGGCGAGTTTGATAATGCTGGTGCTATGATGAGTGTGGATGACACCTTGACATGCTCTTTCCAAATCCTCAAAGCTTCTGATAAGAAAGGGAAAGGTGGATTTGGAAACAGCACGCTAAGACCAGGAACTCCACCCCATAAGAAACGTTGGCATCCCTCACCTACTGTTTATGCCATGGACGCCTGGCGAGCCGAGCTTATAGAAACGAGGCCTTTTGACGAAGCCAAGTCAATTTCGAGCCACCAAACCCTGCAACTGATGAGAAGGCCTTATGAAGTAGGGGGAAGTGTGTACGTTGTCACACTCCCTGCCTTCAAAAGGTGCCTAGAGGACGGGCCAGAAGATGCCGCAGAGCGACAACCGGGGAGTGAATTCCCCACCGGTTTGGGAACAGGAGACAGCCATCTCGAGGAAGGCAAACATATTTCTATTTCTAGACTTTTCTCTCACCTGTCCAGCATCCAAACGAGATTTTGTGTTTCTGGAAGCAAAATCCGTCGTGTTTCCATAGCCTGGTTGGCAAACCTGCACTTAAACCCCACTCACTCTCCCGTAGAACGAATCGGTGCGGCAAGAGGAAACGCGATTTCCTCAGGAATGAACAGCACAATGCCAATGAGGCCACCTTCAGTCGTACCCGACCCTGGAGGTGGAAACAATTTACCGCCATCATTAGTCAATTGCTATAGAATCAATTCCTTTGTGGAGCAACTAGCATTGCATGTTCAGCCGGGCCACCAGTCCGACCCTGTTGAATTCTTCAACCTCTGCCTTTCCCTCTCGAGGGGTATTGATTTTGCACTTGCCAATAATGAAATTCCAGGGAAAGCTCAAGATTTGCCCAAATTATTGAAACAGATATGTCAACAGAAAAATCAGAATTTTTTGCAAGCAGCTATTATGGTTCTGATGATATCTGTAAAGCATGCTTGCTACCTTGAATGGTTCCACCCGAAAGATAGTAAAGATCTTTTGACTATTTTTAATGAGATGGGAAAGAGCTACTGTAGTATAGGGGATGTTGATGCTGGATCTAGTCCTTATCAGTCCACGATCTCAACAATAATGGAAAGGTTTTATCCAAAATTTGAAATGGGGCAGATACTTGCATCACTCGAAGTCAAGCCTGGATATGGAGTTTATGCAACTGATTTCCTTATTACAAAGAATACACCGCATTCTCCACAAGATAAAATTTGGTTATTGATGGCACAAACAGACAATTTAAACACGTCTGCATGCCTCATAACTCCTCAACAAGTCAGCTTTCTTCTCAATGGAAAGGGCAGAAGGCCTAATGTTTTGATGGACCCTGGACCACAAATGCCCACAAATGTGACTGGTATGCTTAAATATGGAACGAATCTTCTTCAGGTTGTTGGCCAATTTAACGGTCATTATCTTATACTTGTTGCCTTTATGAGTGACAAATCTTTGCCTGAGAATCCAGTTATTCCAGATTATGTTCAGCCTGCTGTTACCTCACTCAGTGCAGATTCTGATATAATCGAGGGTCCATCACAAATTTCACTGAATTGTCCCATAAGCTTTACACGTATCAAGACTCCTGTAAAAGGACGCTCATGCAAACATTTCCAGTGTTTTGATTTTGATAACTTCATTAAAATAAATTCAAGGAGGCCATCCTGGCGCTGCCCTCATTGCAATCAGTATGTCTGCTATGCAGATGTTTGCCTTGACCGAAATATGGTTGAGGTCCTTAAAAATGTGGGTGACAATGTTACGGAGGTGGTCATAAGTGCTGATGGTTCATGGAAAGCAGTTTTCAAAGATGATGATAATGTGGATAAAATGCAGAATGATGCCCAAAATTCTGGAAAGGAACCGGCTGAGCCAAAAGAATCTACTTGCTCCCCTGGGGTTCTTCCAGATGTTTTGGACCTCACCAATGGCGATGACTTGGAGATAATGGATGCTGGTGAAACCACTGACAGAAAACCTCACCTGGCAGATCTTCCAAGTGAATCTACCACCCCATCTTTAACTTCATTGGGTATGAACACTGCTGGGGTGAACCAAGATGTTGCTGCGCTAGTGGAAGATGACTTTTGGCCTCGAGTTCATGTTGCTTCTGATGGATCGGATACCCCAACAGTTGTTGGCAACTGTGTGCACCATGTTCGGACTGATGCCATCTCTCAAGCAACTAATCAAGAAGCCGTGGATCATGGCAGTACTCTGACTTCTAACACCACAGTGCAAAATCAGTTTTCTGCGCCAAACTATTTCCAAATGCAGCAGTCAAACTATTTGAATTCAGCTGTCAATGAGCATGTAAGGTCGCAACAAATACCAAGACATGTTAATAGGAATCCAGTAGCAGTTCAGGCACTCCCAGCACAATCCCAGGCATCGGGACCACAGAAAAGATCAAGAACTAATTTGAGTCCCTTGATAACCGTTAGTTCCACTGTTGCTCCTCATGTTTCTGTGTCCAGCCCAGCCAACGGTTTCAGTCCCATACTGAGTGATACGGAAAGGCAGCAGCACTTCTCCCGACCCACTATGAATCTTCCTCAGCTTGTGGGAGCAACTGTATCTGTATTGCAGCATCACTCTGCAACACAGAGCCGAGCCCCACAGATGGCTAATGCTTCGGTACCAAGTCAACTGCCAAATTCATACAACACATCTAGCTTTTTAAGGGAATTTCAAAATGCACACCTACAGCGAGCCCTCAATTCAAGTCCAATTATTCAATCAAATGGTCAGTCAACAAGTGCTGTGCGTTCCTCCCGACCTCATGTTCCGTTGGGTGGTTCACAATCTGGCATTGGTCAGGCAACAGGAACTCCAGCAAATGGCCATCCAACCAGGGATATGAATGCAGGCTGTGTGCCTAGACAGCCGGCAGCATCCTTACCAATTCAAAATCAAACTCCCAGAGAGCATGGTGGAAATGTGAGAGGACCTGCAGAGTCATTATCTAGGACTGATGGTTCATTGAATTTGCAGTCAGAGTCGGACTGGAGGCCGGCAGGTCGAATGCGTGGGAGTCTCACCGGTCGGCAATATTCTGATGCTGTTAGACAGCTTATAATTGAGCCAACTCAATCAGCGCGAAGTGCAAGGACTCTAGGCCCTCAGTCAGGCCGACCAAGTAGTGTTTCACACCACCCCAAGTAG 4116 0.4487 MDDNLLDDIIRRLISAKNGRTTKQVQLTESEIRQLCVSSKEVFLSQPNLLELEAPIKICGFHETVNLNGDMLVPLTRLGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLKNLDQIRNIARPIDVPDQGLLYDLLWADPDKDLDGWGENDRGVSFTFGADKVVEFLEKHDLDLICRAHQAEVKGYSEEVQKVLDEFEDVFKEPQVVCSSGNTSNGLDSRLKLKYLKLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASDKKGKGGFGNSTLRPGTPPHKKRWHPSPTVYAMDAWRAELIETRPFDEAKSISSHQTLQLMRRPYEVGGSVYVVTLPAFKRCLEDGPEDAAERQPGSEFPTGLGTGDSHLEEGKHISISRLFSHLSSIQTRFCVSGSKIRRVSIAWLANLHLNPTHSPVERIGAARGNAISSGMNSTMPMRPPSVVPDPGGGNNLPPSLVNCYRINSFVEQLALHVQPGHQSDPVEFFNLCLSLSRGIDFALANNEIPGKAQDLPKLLKQICQQKNQNFLQAAIMVLMISVKHACYLEWFHPKDSKDLLTIFNEMGKSYCSIGDVDAGSSPYQSTISTIMERFYPKFEMGQILASLEVKPGYGVYATDFLITKNTPHSPQDKIWLLMAQTDNLNTSACLITPQQVSFLLNGKGRRPNVLMDPGPQMPTNVTGMLKYGTNLLQVVGQFNGHYLILVAFMSDKSLPENPVIPDYVQPAVTSLSADSDIIEGPSQISLNCPISFTRIKTPVKGRSCKHFQCFDFDNFIKINSRRPSWRCPHCNQYVCYADVCLDRNMVEVLKNVGDNVTEVVISADGSWKAVFKDDDNVDKMQNDAQNSGKEPAEPKESTCSPGVLPDVLDLTNGDDLEIMDAGETTDRKPHLADLPSESTTPSLTSLGMNTAGVNQDVAALVEDDFWPRVHVASDGSDTPTVVGNCVHHVRTDAISQATNQEAVDHGSTLTSNTTVQNQFSAPNYFQMQQSNYLNSAVNEHVRSQQIPRHVNRNPVAVQALPAQSQASGPQKRSRTNLSPLITVSSTVAPHVSVSSPANGFSPILSDTERQQHFSRPTMNLPQLVGATVSVLQHHSATQSRAPQMANASVPSQLPNSYNTSSFLREFQNAHLQRALNSSPIIQSNGQSTSAVRSSRPHVPLGGSQSGIGQATGTPANGHPTRDMNAGCVPRQPAASLPIQNQTPREHGGNVRGPAESLSRTDGSLNLQSESDWRPAGRMRGSLTGRQYSDAVRQLIIEPTQSARSARTLGPQSGRPSSVSHHPK 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0713 1371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 797 917 IPR013083 -
Lele52g0713 1371 MobiDBLite consensus disorder prediction 922 951 - -
Lele52g0713 1371 Pfam Serine-threonine protein phosphatase N-terminal domain 6 53 IPR031675 -
Lele52g0713 1371 ProSitePatterns Serine/threonine specific protein phosphatases signature. 137 142 IPR006186 GO:0016787
Lele52g0713 1371 CDD SP-RING_PIAS_like 833 880 - -
Lele52g0713 1371 Pfam MIZ/SP-RING zinc finger 832 880 IPR004181 GO:0008270
Lele52g0713 1371 Pfam Calcineurin-like phosphoesterase 78 265 IPR004843 GO:0016787
Lele52g0713 1371 Gene3D - 1 358 IPR029052 -
Lele52g0713 1371 SUPERFAMILY Metallo-dependent phosphatases 21 350 IPR029052 -
Lele52g0713 1371 MobiDBLite consensus disorder prediction 435 459 - -
Lele52g0713 1371 MobiDBLite consensus disorder prediction 1345 1371 - -
Lele52g0713 1371 SMART pp2a_7 27 350 IPR006186 GO:0016787
Lele52g0713 1371 CDD MPP_PP1_PPKL 6 347 - -
Lele52g0713 1371 MobiDBLite consensus disorder prediction 1228 1266 - -
Lele52g0713 1371 FunFam Serine/threonine-protein phosphatase 70 295 - -
Lele52g0713 1371 Coils Coil 261 281 - -
Lele52g0713 1371 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 11 352 - -
Lele52g0713 1371 MobiDBLite consensus disorder prediction 1228 1333 - -
Lele52g0713 1371 MobiDBLite consensus disorder prediction 971 993 - -
Lele52g0713 1371 PRINTS Serine/threonine phosphatase family signature 136 160 IPR006186 GO:0016787
Lele52g0713 1371 PRINTS Serine/threonine phosphatase family signature 199 226 IPR006186 GO:0016787
Lele52g0713 1371 PRINTS Serine/threonine phosphatase family signature 103 130 IPR006186 GO:0016787
Lele52g0713 1371 PRINTS Serine/threonine phosphatase family signature 256 276 IPR006186 GO:0016787
Lele52g0713 1371 PRINTS Serine/threonine phosphatase family signature 74 101 IPR006186 GO:0016787
Lele52g0713 1371 PRINTS Serine/threonine phosphatase family signature 170 196 IPR006186 GO:0016787
Lele52g0713 1371 PRINTS Serine/threonine phosphatase family signature 312 328 IPR006186 GO:0016787
Lele52g0713 1371 MobiDBLite consensus disorder prediction 1304 1318 - -
Lele52g0713 1371 MobiDBLite consensus disorder prediction 355 375 - -
Lele52g0713 1371 ProSiteProfiles Zinc finger SP-RING-type profile. 821 902 IPR004181 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0713 Lele-ChrLele52 4481494 4510179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0713 78 259 Calmodulin-binding Proteins AT5G63870 30.876 5.24e-25 105