Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0712 ATGCTAGTTAATTTGGGGAGTCAAAATGCAAAAGAAAAAAATTGGAGAAGTAATCCTTGTAGTAACAGGGCGAAGTTTCTAGATAAATACAAGTCGTCGAAAGTTAAGCTCGTCAACTCAAGTCAGCTCGTTCCTTCCCTCTATCTGTTCAAAACTCGGCAACTCCTCCCTACCACCGAACTGCCTGTGATTTTGACTTCGGAATTCAGTACGCAACGCGACGCTGCAATGGCAACCGAACTTGAAAAGAAAGCCAAGGAAGCGTTCTTCGACGATGACTTCTCTCTCGCCGTTCAATTGTACTCTCAAGCAATCGACTTGGATCGCTCCAACGCCGATCTTCTTGCCGATAGAGCTCAGGCCTACATTAAACTTAACAACCTCACTGAAGCGGCTTCGGATGCAAACAAAGCAATCGAATTGAACCCGTCTTTGACAAAAGCATATCTTCGCAAGGGGACTGCATGCTTAAAGCTTCAAGAGTATCATAATGCTAAGGTGGCGCTTGAAACTGGTGCTTCATTGTCTCAAAACGATTCAAGATTCACCAAGTTGATCGAAGAATGTAATCGCCATGTTACAAAGGAATCCAATGGTCTCACTAGCTATTTATCATCAAATAATGGGGCAGCATTATCTCTATCGCCTTGTAAAACTGAAGAAGATGGAAGATTTAGTCGTGCATATCAAGCACAAATTGATACCTCTGCGAAAACAAGATACAGACATGAATACTACCAAAAGCCAGAAGAAGTGGTTTTGACTATTTTCGCGAAAGGAATACCCGCAAAAAATGTGGTTGTTCAGTTTGGTGAACAAATTCTGAGCGTTACTATTGATGTTCCTGGCCAAGAAGTCTACCACTATCAATCTCGATTGTTTGGAAAGATAATACCTGATAAGTGCAGATTTGAAGTGCTATCGACCAAAATTGAAATCCGTCTAGCAAAAGCTGAAACCATTAATTGGACATCTTATGAATACAGCAAGGATGCACTTCCTCAGACAAGAATTATCCCATCAGCTGGATCTCATAGGCCTGCATACCCATCATCACAGCCTAAGAAAGATTGGGATAAGCTGGAAGCTCAAGTGAAGAAAGAGGAGAAGGAAGAAAAGCTAGATGGTGATGCTGGTTTGAACAAGCTGTTCCGAGATATATTCCAAAATGCAGATGAGGACATGAGAAGAGCCATGACCAAGTCTTTTGTTGAATCGAATGGGACTGTTCTGTCAACAGACTGGAAAGAAGTGGGAGCAAAGAAGGTGGAAGGAAGTCCTCCGGATGGTATGGAGCTGAAGAAATGGGAATATTGA 1317 0.4229 MLVNLGSQNAKEKNWRSNPCSNRAKFLDKYKSSKVKLVNSSQLVPSLYLFKTRQLLPTTELPVILTSEFSTQRDAAMATELEKKAKEAFFDDDFSLAVQLYSQAIDLDRSNADLLADRAQAYIKLNNLTEAASDANKAIELNPSLTKAYLRKGTACLKLQEYHNAKVALETGASLSQNDSRFTKLIEECNRHVTKESNGLTSYLSSNNGAALSLSPCKTEEDGRFSRAYQAQIDTSAKTRYRHEYYQKPEEVVLTIFAKGIPAKNVVVQFGEQILSVTIDVPGQEVYHYQSRLFGKIIPDKCRFEVLSTKIEIRLAKAETINWTSYEYSKDALPQTRIIPSAGSHRPAYPSSQPKKDWDKLEAQVKKEEKEEKLDGDAGLNKLFRDIFQNADEDMRRAMTKSFVESNGTVLSTDWKEVGAKKVEGSPPDGMELKKWEY 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0712 438 ProSiteProfiles TPR repeat profile. 112 145 IPR019734 GO:0005515
Lele52g0712 438 SUPERFAMILY TPR-like 77 189 IPR011990 GO:0005515
Lele52g0712 438 Pfam Tetratricopeptide repeat 112 144 IPR013105 -
Lele52g0712 438 MobiDBLite consensus disorder prediction 352 372 - -
Lele52g0712 438 MobiDBLite consensus disorder prediction 340 372 - -
Lele52g0712 438 Gene3D - 239 330 IPR008978 -
Lele52g0712 438 Pfam CS domain 242 317 IPR007052 -
Lele52g0712 438 CDD p23_CS_SGT1_like 244 327 - -
Lele52g0712 438 FunFam Protein SGT1 homolog A 236 339 - -
Lele52g0712 438 PANTHER PROTEIN SGT1 HOMOLOG 77 436 IPR044563 GO:0051087
Lele52g0712 438 Pfam Tetratricopeptide repeat 147 178 IPR019734 GO:0005515
Lele52g0712 438 ProSiteProfiles CS domain profile. 238 327 IPR007052 -
Lele52g0712 438 ProSiteProfiles SGS domain profile. 348 438 IPR007699 -
Lele52g0712 438 Pfam SGS domain 356 436 IPR007699 -
Lele52g0712 438 SUPERFAMILY HSP20-like chaperones 232 332 IPR008978 -
Lele52g0712 438 Gene3D Tetratricopeptide repeat domain 68 202 IPR011990 GO:0005515
Lele52g0712 438 SMART tpr_5 146 179 IPR019734 GO:0005515
Lele52g0712 438 SMART tpr_5 78 111 IPR019734 GO:0005515
Lele52g0712 438 SMART tpr_5 112 145 IPR019734 GO:0005515
Lele52g0712 438 FunFam Protein SGT1 homolog 77 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0712 Lele-ChrLele52 4475735 4480558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0712 75 195 U-box Gene Family AT3G07370 26.446 3.49e-06 46.6