Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0710 ATGGTTGGGATCGTTCTAAGAGCCAACAAAGCACAGCCTGCGTCTTCTGCTATTTCCTTCATGGATGAACTTGCGTGCTTCATGGACTGGGATTTGCAAGCTATTGTAAGAGGGTTCACCGGCGAAGCCCCAGTAACAACAACGACAACCACGATCATAGATATCACACATCCTAATTTATCTCATTTCTGTTCTGAATTTCAATTTCCCGATGATCCTTTCTGCAGTACTTTCCCAGAATTCTCAGACACCACCATGGTGCTTGATGAATTGGCAGAACTTTTCAAGCCTTTCTCAACACAGACCATCACCACCACCACCACTTCCGTAGCCATCCCTAAAGAAGTCAAAGCATCATTAGAGGAAGTACAAGATTTGCATGAATCTCAAAGCAAAAGAAGCAAGAAGAACCAGAACAAGAGAGTAATGAAGAAGGTGAGAGAAGGTGGACTATGCGACGCATGGGCATGGCGTAAATACGGACAGAAACCGATCAAGGGATCTCCATATCCAAGAAGCTATTACAAATGTAGCAGCTCCAAAGGATGCATGGCGAGGAAACAAGTGGAAAGGAGCCATATGGATCCTCAAATTTTCATAGTGACTTATACTGCAGAACACAGTGATCATCACCCACCTCGTTCCTCTCGAAAAACTAGGCACTCTAATATCATTCCACCGCCTGAAACTACTCAACAAACTTCTTCCGATCCTTTGGAAGACTCCATTATTGAAGATGAGCTAATTGTGTCCAAAGGTGCTGAAATTGGTGAGATTGTCACAAATGATGATTGGTTTCCAAGTATAGACGAACTTGATGGACTTAGCAAAGAATTCGCATTAGGTGGTTACCTTCATGGTCAATTCTGA 870 0.4322 MVGIVLRANKAQPASSAISFMDELACFMDWDLQAIVRGFTGEAPVTTTTTTIIDITHPNLSHFCSEFQFPDDPFCSTFPEFSDTTMVLDELAELFKPFSTQTITTTTTSVAIPKEVKASLEEVQDLHESQSKRSKKNQNKRVMKKVREGGLCDAWAWRKYGQKPIKGSPYPRSYYKCSSSKGCMARKQVERSHMDPQIFIVTYTAEHSDHHPPRSSRKTRHSNIIPPPETTQQTSSDPLEDSIIEDELIVSKGAEIGEIVTNDDWFPSIDELDGLSKEFALGGYLHGQF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0710 289 ProSiteProfiles WRKY domain profile. 146 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele52g0710 289 MobiDBLite consensus disorder prediction 219 239 - -
Lele52g0710 289 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 28 229 IPR044810 GO:0003700
Lele52g0710 289 MobiDBLite consensus disorder prediction 123 143 - -
Lele52g0710 289 Gene3D WRKY domain 135 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele52g0710 289 SUPERFAMILY WRKY DNA-binding domain 150 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele52g0710 289 MobiDBLite consensus disorder prediction 205 239 - -
Lele52g0710 289 Pfam WRKY DNA -binding domain 153 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele52g0710 289 SMART WRKY_cls 151 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0710 Lele-ChrLele52 4459450 4460941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0710 21 234 WRKY Transcription Factor Family AT4G23550 43.697 2.06e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele52g0710 WRKY 1.1e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0685 49 4149642 4150598 Lele52g0710 52 4459450 4460941 hybridization
Lele50g0718 50 4407681 4409293 Lele52g0710 52 4459450 4460941 hybridization