Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0700 ATGGGCCATCACTCTTGCTGCAATCAACAGAAGGTTAAGAGAGGGCTTTGGTCTCCTGAGGAAGATGAGAAGCTCATCAGATACATTACCACTCATGGCTATGGCTGTTGGAGTGAAGTCCCCGAGAAAGCTGGGCTGCAACGGTGCGGTAAGAGTTGTCGCCTGAGATGGATTAATTATTTAAGGCCTGATATTAGAAGAGGCAGGTTTACTCCTGAAGAGGAGAAGTTAATTATAAGCCTTCATGGTGTCGTCGGCAACAGGTGGGCTCACATTGCAAGCCACTTGCCTGGAAGAACTGATAACGAGATAAAGAACTATTGGAATTCTTGGATCAAAAAGAAAATAAGAAAGCCTTCATCAGTGTCTTCAACCACAAGAAGTTCACAAACTAATAGCGCCGATCCTCCTCCTCCTCCTCCTCAGTATAACTTCAATAATCCCAACCAATTAGACTTTGCAAACCAAGATAATCATCTAACAACAAAACCACCAGCAGTAGTTCATCATCAAGACACAACCATATTTTCTTCGACATGCCCCTTATTTATGTTTGACACTAGCTCTTTAGATGGTTCTGCAACAACGATCACGACATTACTGGACAACAACAATAATGCAACAAGACCAGAAATGTTAATCCATCAGCAAGATCATGCTACTACTATGGGTTTAAGCAGTTCAGAAACATGGAATGTGATGAGCCACCATCATCAAATTCAAGCCTTTCCTCATCATCTTCCTCCTTCGTCGGTTTCTTTCACGACGGCGGGTTCAGGCATGGTGTCTTCTAATTATCTGCCGCCGTTGATAGAGAATGTGGACAACATGGTGCCGAATATTCATGAAGTGCAATCTTGCAGTATAGACGAAGAGGGTGAAATTGCACTAGAGTGCTTGCAGAGGCAAGAGTTGAACGAGTGGGTGGTGGATACACAGCAACAATGTTCCAACTTTATTTTCTGGGAAAGTGTGGATGGACAACTTGGTGGGGAAGAAATAGCACCAAATTCGTCAAATTTGGCAACTACACTTTCTTCTTTTCCTTCGTCCTTATGA 1059 0.4315 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKPSSVSSTTRSSQTNSADPPPPPPQYNFNNPNQLDFANQDNHLTTKPPAVVHHQDTTIFSSTCPLFMFDTSSLDGSATTITTLLDNNNNATRPEMLIHQQDHATTMGLSSSETWNVMSHHHQIQAFPHHLPPSSVSFTTAGSGMVSSNYLPPLIENVDNMVPNIHEVQSCSIDEEGEIALECLQRQELNEWVVDTQQQCSNFIFWESVDGQLGGEEIAPNSSNLATTLSSFPSSL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0700 352 FunFam MYB transcription factor 6 66 - -
Lele52g0700 352 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele52g0700 352 MobiDBLite consensus disorder prediction 119 164 - -
Lele52g0700 352 CDD SANT 17 61 IPR001005 -
Lele52g0700 352 Gene3D - 69 136 - -
Lele52g0700 352 FunFam Transcription factor MYB26 68 136 - -
Lele52g0700 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele52g0700 352 MobiDBLite consensus disorder prediction 146 164 - -
Lele52g0700 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele52g0700 352 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele52g0700 352 PANTHER MYB DOMAIN PROTEIN 55 1 255 - -
Lele52g0700 352 SMART sant 66 114 IPR001005 -
Lele52g0700 352 SMART sant 13 63 IPR001005 -
Lele52g0700 352 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele52g0700 352 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele52g0700 352 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele52g0700 352 Gene3D - 6 66 - -
Lele52g0700 352 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0700 Lele-ChrLele52 4408273 4410078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0700 1 337 MYB Transcription Factor Family AT1G63910 50.820 5.14e-102 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele52g0700 Myb_DNA-binding 5.6e-15 CL0123