Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0699 ATGGGGTTTATGCGGCCAGGTCATCTGGGTTTTCTGATGAATGTGCACAAGAGAATCGATCGAGGAGGTTGCTTTCTTTTTTTCTTCTTTTCTTTGGATTTGTTGTTTTCTTTTCCCCTTTTGGATTCTGATTCGAGAGAGATTGTGAAAAAAATTATTCCTGAGAAGAACCGTCGTGAGATCTGCAAATACCTCTTCAAAGAGGGGGTTTGCTATGCAAAGAAGGACTTCAATATGCCTAAGCACCCCGAGATTGATGTGCCGAATCTACAAGTAATTAAGCTGATGCAGAGCTTTAAGTCCAAGGAGTACGTGCGTGAGACATTCGCTTGGATGCACTACTACTGGTACCTCACTAACGATGGCATTGAGTTCCTTAGAACTTACCTCAACCTTCCTTCCGAAATCGTGCCCGCTACTTTGAAGAAACAAGCAAAGCCAGCTGGCAGACCATTTGGTGGCCCACCTGGTGACCGTCCAAGGGGTCCACCTCGCTTTGAGGGAGAACGTAGGTTTGGCGACCGTGATGGATACCGTGGAGGTCCCCGTGGACCCGGTGGTGACTTTGGAGACAAGGGAGGAGCTCCTGCTGACTACAGACCTTCATTCGGGGGTTCTGGAGGAAGGCCTGGATTTGGTCGTGGTGCTGGGGGTTTTGGAGCACCAACAAGCTCAAATCTTTCATAA 687 0.4833 MGFMRPGHLGFLMNVHKRIDRGGCFLFFFFSLDLLFSFPLLDSDSREIVKKIIPEKNRREICKYLFKEGVCYAKKDFNMPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGSGGRPGFGRGAGGFGAPTSSNLS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0699 228 MobiDBLite consensus disorder prediction 162 178 - -
Lele52g0699 228 Gene3D - 52 154 IPR036388 -
Lele52g0699 228 FunFam 40S ribosomal protein S10 51 154 - -
Lele52g0699 228 Pfam Plectin/S10 domain 53 144 IPR005326 -
Lele52g0699 228 PANTHER 40S RIBOSOMAL PROTEIN S10 52 222 IPR037447 -
Lele52g0699 228 MobiDBLite consensus disorder prediction 141 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0699 Lele-ChrLele52 4405123 4408232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0699 52 227 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 76.271 1.13e-74 222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0674 49 4093788 4101406 Lele52g0699 52 4405123 4408232 hybridization
Lele50g0707 50 4351681 4356715 Lele52g0699 52 4405123 4408232 hybridization