Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0687 ATGGCAGCCACGACAACTACAACAACCACCACCACTGCTTTTCTCAAGGTCCAAAACCAGCCCTCCAAGCCCAGGCGTCGCAAGCCTCGCGAAACCACTATTTCTGCCTCCGCTTCTTCTTCCTCCGACCCAAACGACGCCGTTCCCTCTCGCGCGCTTGATCCTCCCACTGTTGCCTCCCCCAACAACACTTGGTGCTGCCCCACTTCTAAACCCATCCCCACTCCATCCGACCACCCTCACCGCCTTATTAATTCTCCTGAGACTTCATCTCTCAACCGTTATACATTGCCTCCTTCGCCTTCCGATTCGCCCTCCACCTACAGGATTCGGTTCTCGCCTGGTAGGTTTTCTCCGACCATGGATTTTAGCTACTCGGGGAGCCCCGCCAATGGCCACTCTTCTCAGTATTCGTTCCCTTCTAGTTTTACCAAATTCAACTCCGCCCTCACCGCCGGGTTGTTGAATCCAATGTCGCCGCCTCCCCCTTCCGACAAAGCTCGATCGAGCCCCTCCCTTTTTGAAATGATGGCTAGCGAGCCCGATGTACATCCCAGAACCCAGATCCCCCAAAACAATATTGCTCCCTCCGCGCACAAGCCCCTAATTCTGGTGCAGGATAGGCAGGCTGTAATGATGCAGCGAATATCAGACATACTGGCCACCCGCAGCCCTGGTAACCAGTTCAACGATCCGTCCTCCAGTGACATCAAGCTCACTCTCAGTTCCAAAGATGGAATCAGCGTTTCCATGAACGTTCACCGGCAAATTCTTGTTGCCCATAGCAGATTCTTCTCCGTCAAGCTCTCTGATCGCTGGGAGAAGCAGCAGCGGCAGACGCTGCCGTACATTGTTGAAATCGCTGACTGCGATGACGTTGAAATTTACATTGAGACGTTGAGGTTGATGTACTGTAAGGATCTTAGGAAGAAGCTAATGAAGGAGGATGTTTCGAGAGTTCTTGGTATCTTGAAGGTTTCAGCGGCCATTGGGTTTGATGCGGGGGTTCTATCTTGTTTGGAATATTTGGAAGCAGCCCCTTGGGCAGAGGACGAAGAAGAGAAAGTGGCCTCACTTCTATCCGAGCTTCGTCTTGAAGCTGCTGGGGAAGTTTTGAAGAGGGTTTCAACAGAAGTTATTAATGGAAATGAAGAGGGAAATGATAATGAGGAAGTTCTGCTAAAACTCATTCGTGTGGTCCTTGAAGGAAAAGATGAGAAGGCCAGGCGTGAAATGAAAGGTTTAGTGTCAAAGATGCTTCGTGAGAATTCATCTCAAAGTGATCTTCGCAAAGAGTCATTATACTCGGCTTGTGATGATTGTCTGCAACTTCTTAGTCACCATCTTTTGCGAGCTGCAGCTTCTGACTTGGAAGATGTGGGTCAAATTGCACGACAAGCAGATAATCTGCACTGGATTTTGGATATTTTAATTGATAGACAGATTGCTGAGGACTTCCTGAAAACGTGGGCATCTCAATCTGAATTATCTGAAGCTCATTCTAAAGTGCCTGCAGTTCATAGGTTTGAGGTTAGCAGGGTTACAGCGAGATTGTTTGTTGGGATTGGGAAGGGACAATTATTAGCTTCTAAAGATGTCAGGTGTTTACTACTAAAAACATGGTTGGTGCCATTCTATGATGATTTTGGTTGGATGAGGAGGGCATCCAAAGGCCTTGATCGTCATCTAATTGAGGATGGCCTTAGCAACACCATCCTCACTCTGCCACTCTCCTGGCAACAGGAAATCCTGCTTGCTTGGTTTAACCGTTTCTTGAATTCTGGGGAAGACTGCCCAAATATACAAAGGGGTTTTGAAATTTGGTGGAGACGGGCTTTTTGGAAGCGAAATGGAGAACAAGAACGGACACAGCATCTACGAATTACAACTGCCACAATAGACAACCCTTGA 1911 0.483 MAATTTTTTTTTAFLKVQNQPSKPRRRKPRETTISASASSSSDPNDAVPSRALDPPTVASPNNTWCCPTSKPIPTPSDHPHRLINSPETSSLNRYTLPPSPSDSPSTYRIRFSPGRFSPTMDFSYSGSPANGHSSQYSFPSSFTKFNSALTAGLLNPMSPPPPSDKARSSPSLFEMMASEPDVHPRTQIPQNNIAPSAHKPLILVQDRQAVMMQRISDILATRSPGNQFNDPSSSDIKLTLSSKDGISVSMNVHRQILVAHSRFFSVKLSDRWEKQQRQTLPYIVEIADCDDVEIYIETLRLMYCKDLRKKLMKEDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLEAAGEVLKRVSTEVINGNEEGNDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLRENSSQSDLRKESLYSACDDCLQLLSHHLLRAAASDLEDVGQIARQADNLHWILDILIDRQIAEDFLKTWASQSELSEAHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQEILLAWFNRFLNSGEDCPNIQRGFEIWWRRAFWKRNGEQERTQHLRITTATIDNP 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0687 636 MobiDBLite consensus disorder prediction 1 109 - -
Lele52g0687 636 MobiDBLite consensus disorder prediction 1 19 - -
Lele52g0687 636 MobiDBLite consensus disorder prediction 56 71 - -
Lele52g0687 636 ProSiteProfiles BTB domain profile. 235 312 IPR000210 GO:0005515
Lele52g0687 636 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 215 622 IPR038920 -
Lele52g0687 636 MobiDBLite consensus disorder prediction 82 109 - -
Lele52g0687 636 MobiDBLite consensus disorder prediction 33 47 - -
Lele52g0687 636 Gene3D Potassium Channel Kv1.1; Chain A 213 346 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0687 Lele-ChrLele52 4354535 4356780 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0687 52 4354535 4356780 Lele52g0687 52 4354535 4356780 ECH
Lele49g0665 49 4049842 4052096 Lele52g0687 52 4354535 4356780 hybridization
Lele50g0695 50 4301158 4303404 Lele52g0687 52 4354535 4356780 hybridization