Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0670 ATGGACACCAAGGAAGATGTGAGGGTGGGAGCAAACAAGTTCTCAGAGAGGCAGCCGTTGGGAACGGCGGCTCAGGGCGACAAGGACTACAAGGAGCCACCACCGGCACCATTGTTCGAGCCAGGTGAGCTCAAATCATGGTCATTCTACAGAGCCGGCATCGCAGAGTTCGGTTTTGAGGGTACTCCACGGTATCAGTTGAACAGTGGTGGGGCGAATATCGTAAGCCATGGATACACCAAGGGCGATGCTCTTGGAGCTGAGATTGTTGGAACCTTCGTCCTTGTCTACACTGTGTTCTCTGCCACTGATGCTAAGAGAAACGCCAGAGACTCTCACGTTCCTGTTTTGGCTCCTCTTCCGATCGGATTTGCTGTGTTCTTGGTGCACTTGGCAACCATTCCCATCACAGGAACAAGCATCAACCCAGCCAGAAGTTTGGGTGCTGCCATCATCTTCAACAAGGATGCTGCATGGGATGATCATGTAATGTTCTTTTCTTCTCTTAAAGATTCTTCAAGTTACTTGACTTGA 534 0.5037 MDTKEDVRVGANKFSERQPLGTAAQGDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFGFEGTPRYQLNSGGANIVSHGYTKGDALGAEIVGTFVLVYTVFSATDAKRNARDSHVPVLAPLPIGFAVFLVHLATIPITGTSINPARSLGAAIIFNKDAAWDDHVMFFSSLKDSSSYLT 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0670 177 Pfam Major intrinsic protein 65 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele52g0670 177 Gene3D Glycerol uptake facilitator protein. 47 168 IPR023271 -
Lele52g0670 177 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 11 57 IPR034294 -
Lele52g0670 177 MobiDBLite consensus disorder prediction 1 34 - -
Lele52g0670 177 PRINTS Major intrinsic protein family signature 87 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele52g0670 177 PRINTS Major intrinsic protein family signature 123 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele52g0670 177 SUPERFAMILY Aquaporin-like 65 165 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0670 Lele-ChrLele52 4243895 4245141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0670 65 166 Major Intrinsic Protein MIP AT4G23400 86.275 1.17e-59 186