Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0668 ATGGAGGCTATAGCTAAAGGTCTAAAGCTGAGAACATGTATAGCTGAAAGAAATGACGTGCAATGGAAACTAGCTTTTCTGTTTATCATGGCGAGACGATCATCATCTTCAAAAGTAGTTCCTGTAAGTCAAGTGTGCGAGACAGGTTGCAGCTCGCGACTATACAGAATCTTGAATTTTCGAGAAGGTCAGGCCACAAAAAGACTGGTCTCTAATACCAGACATTCCAATATACACGCCATTGAAAATGGACACTCAGGAAAAAGGCCGGATGTTCTTAACGTAGTTGATGAAAATCACTCTCACAATCACGCTAAAGTAAGTTCCAAGAGGAGTTATTATGGTTGTAAGAGTATAAGCTGTTTGAAGAATTGTCAAGTAGCAATCGTTCAAGGAAATGAAGCAATAAACAAAGTTGTAGCTCGAAATTTCATCAACGGGAAATATCTGTGCAAAGATGGAGCTATAGTCTCCCAACCTCATCAATTCTTGGATGCTTTACAGATTTTATGCACAAACAAGGAACTCTTCCTAAAACTTGTTCAAGACCAAAACTCTGTATCAGTAAAAGAACACCATCTAACAAAAGACGGTGATGATGAAGCAAGGGGATTGGAGAGTGTTGAGAGGAAATCGGATAGAAGTATCCATTCTGGTTTTCCAAAAGGAGGGAAGTTATCCCTTGATTTCAAGGGGAGAGAGAAGATGAAGATAAGAGACTTTATGTCATGTAGAGGACAGAACGCTGTTTCCGTTCGTGAAAGTCGTGGTAGGAACATAACAAGAACTTCAGTCAGCCCTTCACGGCAAATTATACAGAACATGCATGTTGAAGCTACGAAAAATCTATCCGAGACATTAAATTGCAGAATTGAAGAGCAGAACAATAATGAGCCACCAGGGGCTGCTATGAAGACAGTTAAAGGTGAGTTTCATTGTTTCGACGAAAATGTCGAAAAGAGTCCTCCTGACAATAGTTATGCATATCATGGGATTCCGACAGGTTCTGGGAAATCCATAAAATCTGGTTACGACTTGGATCATCCGAAAGGTATCAGAGATATGGATGTGCCCTCAGCCTTAGAACAAGATAGCAGAAATACGGACAGTCCTACTCAGAGTTTTGACGTGGATATTACAAGTGAAGGAAATGGATCTGTTATGGATTCGCCTCATGTGATCGAGAATCTATATTGTTCCTCACCAGAAGTTGATTCATTAAGCTCTTCGTCTTGTCAGAGTGTAGATGATTCCATGGACATGAGAAACATAGTTGATGATGAGCACCTCAGTTCTGAATCTACTACTGAGAAAGTTATGAGGGAGGTAATCATCACCAACCCACCACCAACCACCGTCACACAACCTGATGATGAGTTGCTTATTCAGGCAGTGAATGAAAATTCTGAAGAGCACAATTCTGCCGATCTTGTAAGATGTTCTTCAGATCTAGTGAATAACTTAATTACCGCAACGGACATGTCAGAGTCAGATTGCAACAGAGAACTTTTGCGGTCATTGAGTCTGAAATGGGATGAACTGGTGATGAAGCGTGAGTTACCAGACCAAGTTATGGAACAAATAATAGGGTTAAAGAACCAACTCTCTGGCAGTAAAATCTTATTTGACCATGTAATGGAAGTCTTCATGGAGACATACCAGAACTTGTGTAGATTCCCACATTATATTCCAATGGGGAAACCAAATATTCAAGCATATGTCTTGAAGAGAATCATGATTTATGAAGTTAAAGAATTCATGGATTTGCATCATCACCTGCACCTTCAACAACCACCAAGAACGCTAGAACATCTTCTCGAAAAGGACTTGGCTAGACGACGATCATGGCTAAATGTTCAAGCTGATATTGATGATATTGGGATAGAAGTGCAGGAAGATGTTCTCCAAGAACTGATATTGGAAATTATATCTGAGACGGATACCAGAGAAGCGTGA 1956 0.4024 MEAIAKGLKLRTCIAERNDVQWKLAFLFIMARRSSSSKVVPVSQVCETGCSSRLYRILNFREGQATKRLVSNTRHSNIHAIENGHSGKRPDVLNVVDENHSHNHAKVSSKRSYYGCKSISCLKNCQVAIVQGNEAINKVVARNFINGKYLCKDGAIVSQPHQFLDALQILCTNKELFLKLVQDQNSVSVKEHHLTKDGDDEARGLESVERKSDRSIHSGFPKGGKLSLDFKGREKMKIRDFMSCRGQNAVSVRESRGRNITRTSVSPSRQIIQNMHVEATKNLSETLNCRIEEQNNNEPPGAAMKTVKGEFHCFDENVEKSPPDNSYAYHGIPTGSGKSIKSGYDLDHPKGIRDMDVPSALEQDSRNTDSPTQSFDVDITSEGNGSVMDSPHVIENLYCSSPEVDSLSSSSCQSVDDSMDMRNIVDDEHLSSESTTEKVMREVIITNPPPTTVTQPDDELLIQAVNENSEEHNSADLVRCSSDLVNNLITATDMSESDCNRELLRSLSLKWDELVMKRELPDQVMEQIIGLKNQLSGSKILFDHVMEVFMETYQNLCRFPHYIPMGKPNIQAYVLKRIMIYEVKEFMDLHHHLHLQQPPRTLEHLLEKDLARRRSWLNVQADIDDIGIEVQEDVLQELILEIISETDTREA 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0668 651 Pfam Protein of unknown function (DUF3741) 143 186 IPR022212 -
Lele52g0668 651 Coils Coil 277 297 - -
Lele52g0668 651 MobiDBLite consensus disorder prediction 361 389 - -
Lele52g0668 651 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 130 198 - -
Lele52g0668 651 MobiDBLite consensus disorder prediction 191 220 - -
Lele52g0668 651 MobiDBLite consensus disorder prediction 191 218 - -
Lele52g0668 651 MobiDBLite consensus disorder prediction 361 387 - -
Lele52g0668 651 Pfam Domain of unknown function (DUF4378) 488 641 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0668 Lele-ChrLele52 4231467 4235913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0668 501 632 TRM (TON1 Recruiting Motif) Superfamily AT1G01695 32.143 6.53e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0676 50 4167282 4169933 Lele52g0668 52 4231467 4235913 hybridization