Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0666 ATGGTATTCTTCACGGCTCCAAGACGGGCCACCGCTAAAAGGTCTATGCGATTCTGGGACACTGTAAACCCAGCAAGACGCGAAATGGTACCAGAGAACCTGAAGAAACAACTCGCCTTGGCCGTGAGAAGCATCCAATGGAGCTACGCAATCTACTGGACTGTTTCACCTGACAATCCCGGGGCGTTCGAGTGGGGTGAAGGGTACTACAACGGGGACATAAAGACGAGGAAAACAAGCCAAGCAGTGGAACTTAATTCCGACCAAATAGGTTTAAGGAGGAGTGAGCAGCTCAGAGATCTATATGAGTCCCTTGCAACTGCAGAATCAAGTCCACAAGCTAAAAGGCCTTCAGCTGCATTATCTCCTGAGGATCTCACTGACACAGAATGGTATTATTTGGTGTGCATGTCATTCGTATTCAACATTAGCCAAGGATTGCCTGGAAGAACTCTGGCCAAAGGCCAACCCATTTGGCTGTACAATGCCCATTTGGCTGATAGTAGAATTTTTAGTCGCTCTCTTCTGGCAAAGAGTGCATCCATTCAGACGGTGGTATGCTTTCCTTTTCTGGATGGTGTTCTCGAGCTAGGTACAATTGATCCGGTCTCAGAGGACCTCAGTCTCATTCAACGCATGAGAACTTCTTACTTGGATATTTTAGATGCCAAAGGTCGCAAGAACTCTGTAGTTGCATTCAATGCAGGAGACGGTGAAGAAATTGCTGGCGCAGTATTTGACCACAATGCTGAGTCAGAATATGAAGTAGCCAATGCAATTTCTCCCAATAATAGTTCAAATGAGTTACAAGCCAATAAACAAGCAGATGAGAGATTCATGGCTGAAAGAATAAATGGCGTTGCTACTTCCCACCATGTCCAAAACTGGCAAGTGATGGAGGATGAGTTGGGTAATTGTGCCCATACTTCAATGAATACTAGTGACTGTATATCCCAAACTTTTGCTGGTTCTGAAAAGAATAATGCTTCTGTTCCAAAGGGTGATCATCGTGGGCAAGATCTTCAAGAGGGAAAAAACACGAAAACGACTGTGGTTGATGTTCATAGTGATGATTGGCATTATCAAAGTGTTCTTTCTTCTCTTCTTAAAAGCTCAGACCAATTAATCATGGGAGCGCATTTTCAAAACTTCCATTGTGAATCTGGCTTTGTCGGTTGGAAGAGAGAAGGACCAACTGGTGGTTGTCAATGGTCAAGAGGAGGGACCCACCAAAAATTATTGAAGAAGATATTGTTTGAAGTTCCTCGTATGCCCATGGATTGGTTGCTCGAGTGTCAAGAAGAAAATGACTATAAAGAGGGAATGAGACCTGAAGCTGCTGATGAAATTGGCTTGAACCATGTACTGTCTGAAAGAAAGAGAAGGGCAAAACTAAATGAAAGGTTTTTAACCCTTAAATCTATGTTTCCTTTGATTACTAGGGATGACAAAGTTTCAATACTAGATGAGGCAATAGCATACCTTAAAAAGCTGGAGAAAAAGGTGAGAGATTTGGAAGCTCGCCGGGAATCCAAAGGTTCGGAGACAAGAACTAAAAGAGCACCTCAAGATGTGGTGGAAAGGACTTGTGATAATTATTGTAACAACAGATCAGATAATGGCAAGAAGCCAGCAATGAACAAAAGGAAGGCTTGTGACATTGATGAGACAGAGACTGATTCAGTTCGTCTAAAAGATATTTCTAATAATGTTACTATCTGTATGAATGACAATGAGGTTTTGATTGAATTGAAGTGTCCTTGGAGAGAAGGAGTTCTACTAGAAATAATGGAAGCAGTCAGCAATCTTCATTTAGATTTTCATTCAGTCCATTCATCAGAAGCTGATGGGACTCTCTATTTAACCATGAAATCCAAGATCAGAGGAGCAGCTTTTACATCAACAAAAAAGATCAAACAAGCACTGGTCAAGGCAGCTTGGAAGTGTTGA 1950 0.4226 MVFFTAPRRATAKRSMRFWDTVNPARREMVPENLKKQLALAVRSIQWSYAIYWTVSPDNPGAFEWGEGYYNGDIKTRKTSQAVELNSDQIGLRRSEQLRDLYESLATAESSPQAKRPSAALSPEDLTDTEWYYLVCMSFVFNISQGLPGRTLAKGQPIWLYNAHLADSRIFSRSLLAKSASIQTVVCFPFLDGVLELGTIDPVSEDLSLIQRMRTSYLDILDAKGRKNSVVAFNAGDGEEIAGAVFDHNAESEYEVANAISPNNSSNELQANKQADERFMAERINGVATSHHVQNWQVMEDELGNCAHTSMNTSDCISQTFAGSEKNNASVPKGDHRGQDLQEGKNTKTTVVDVHSDDWHYQSVLSSLLKSSDQLIMGAHFQNFHCESGFVGWKREGPTGGCQWSRGGTHQKLLKKILFEVPRMPMDWLLECQEENDYKEGMRPEAADEIGLNHVLSERKRRAKLNERFLTLKSMFPLITRDDKVSILDEAIAYLKKLEKKVRDLEARRESKGSETRTKRAPQDVVERTCDNYCNNRSDNGKKPAMNKRKACDIDETETDSVRLKDISNNVTICMNDNEVLIELKCPWREGVLLEIMEAVSNLHLDFHSVHSSEADGTLYLTMKSKIRGAAFTSTKKIKQALVKAAWKC 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0666 649 Coils Coil 488 515 - -
Lele52g0666 649 PANTHER TRANSCRIPTION FACTOR TT8 27 643 - -
Lele52g0666 649 SMART finulus 455 504 IPR011598 GO:0046983
Lele52g0666 649 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 452 513 IPR036638 GO:0046983
Lele52g0666 649 Gene3D - 452 521 IPR036638 GO:0046983
Lele52g0666 649 Pfam Helix-loop-helix DNA-binding domain 453 499 IPR011598 GO:0046983
Lele52g0666 649 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 449 498 IPR011598 GO:0046983
Lele52g0666 649 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 34 216 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0666 Lele-ChrLele52 4222457 4226186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0666 27 649 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 48.165 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele52g0666 bHLH-MYC_N 5.6e-48 CL0161