Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0665 ATGAGTAATACCAAGGTGAGGATCGATGCGGGTTGTAGGTGCCAACTCCAAGGAGGGCAATCTGCTCAACAACCTTGGCTTGATGGAAATGGAGCACTGCAACAATGGAGACAACGTAACACTATGAAGATGACACTTGCAAAGTCGAACGCCGCATGTGCTCCCGAGCATCACAATGGAAGTAAGTCTAATGAACTGTTCCAGTTGAATCAAGAATCGCATGTGGATCTTTTTCCCGCTAAAATTATGGAATTGCCTTCAAACAGTTTGGAAAGTACCCCAACTCCACTGCTCTTCAACGTCGGAAATAGGATTCTGAATGACATATTTGTGAGAATGAATGGAGATGTACCTCATCATGAGAAAACTGAACTGGAGAAGAAGAAACTTGAAGAGCAGGATTATGCTCAATTTAAAAGGGACAAAGTTCGCTATGAAATTGAGATTTCTGCACTGAAGAAAGAACTGGAAACGACTAAAAGGGCACATGAAGAGCAGTGCTCGCTGTTAGAATTGCATCGTAGTGAATCTAAAGCTCATTATGAGAAGAGAATAGAAGAACTTGAGAGTCACCTAGCTAATGCAAGGACACAAATGAAGGAACTGAAGACCTTTTTGAAATCCAAATCTTTGAAATGGAAGGACAAGGAGCACACCTTTGAGAGTTTCCTAAATGGCCAATTTGGAGCTTTCCAAGAACTGAGAGCTGCAATGGAATCTGTAAAAATGGAATTACTAAAATCAAAGAGGAGCTACTCCGAGGAACTCAAATACTTAGGAATGAAGCTCAAAGGTCTAGCTGAAGCGGCTGGAAATTATCATGAAGTTCTTGCAGAAAATAGAAAATTGTATAATGAAGTTCAAGATATGAAAGGAACAATTAGAGTATATTGTCGAATCAGACCATTTCTTCCGGGGCAAAGCCAAAAGCAGACAACTATTGAGTTTGTTGGTGATAACGGTGAATTAATTGTTAGCAATCCTCTGAAGCAAGGGACCGAAAGTTGTAAGCTTTTTAAGTTTAACAAGGTTTTTGGTACATCAGCAACTCAAGAGGAAGTATACAATGACATCCAACCGCTCATTCGTTCTGTTCTGGATGGCTACAATGTTTGTATATTTGCATACGGTCAAACTGGTTCAGGAAAGACGTACACCATGAGTGGACCTAGCTTGTCATCTAAATCAAATTGGGGAGTCAACTACCGAGCACTTCATGATCTTTTCCAAATCTCCCAGAGTAGGAGAGGCTCTATCATTTATGAAGTTGGTGTTCAAATGGTTGAAATTTACAATGAAGTAGTTCGTGATTTGTTATCAAGCAAGGGTCCTCAAAAGAGATATCCTTTCCTTTTCTTTTTTCCCCTTATGATTACTAATTTTTAA 1386 0.3975 MSNTKVRIDAGCRCQLQGGQSAQQPWLDGNGALQQWRQRNTMKMTLAKSNAACAPEHHNGSKSNELFQLNQESHVDLFPAKIMELPSNSLESTPTPLLFNVGNRILNDIFVRMNGDVPHHEKTELEKKKLEEQDYAQFKRDKVRYEIEISALKKELETTKRAHEEQCSLLELHRSESKAHYEKRIEELESHLANARTQMKELKTFLKSKSLKWKDKEHTFESFLNGQFGAFQELRAAMESVKMELLKSKRSYSEELKYLGMKLKGLAEAAGNYHEVLAENRKLYNEVQDMKGTIRVYCRIRPFLPGQSQKQTTIEFVGDNGELIVSNPLKQGTESCKLFKFNKVFGTSATQEEVYNDIQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSNWGVNYRALHDLFQISQSRRGSIIYEVGVQMVEIYNEVVRDLLSSKGPQKRYPFLFFFPLMITNF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0665 461 Gene3D Kinesin motor domain 235 450 IPR036961 -
Lele52g0665 461 PANTHER KINESIN-LIKE PROTEIN KLP-3 22 447 - -
Lele52g0665 461 Coils Coil 178 205 - -
Lele52g0665 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 272 445 IPR027417 -
Lele52g0665 461 SMART kinesin_4 291 461 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0665 461 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 235 448 - -
Lele52g0665 461 Coils Coil 135 173 - -
Lele52g0665 461 Pfam Microtubule binding 278 439 IPR031852 GO:0008017
Lele52g0665 461 ProSiteProfiles Kinesin motor domain profile. 293 461 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0665 Lele-ChrLele52 4209894 4216434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0665 196 446 Calmodulin-binding Proteins AT5G65930 33.206 1.01e-31 127