Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0664 ATGGTTTATCTTGACTTGCTTACAATAGGAATTTGGAATACTGCCCAACCAAATGGGTTGGTGGTCCCTGATGCAAGCATGCATTCTGTTAATTCAATGAAAGATGTCTTGGAGTTGATGAATATGGGGCAGATGAATCGAGCAACTAGTGTCACAGCTTTAAATGAAAGAAGTAGTAGATCCCATAGTGTTCTCACTGTTCATGTCCGTGGCACGGATTTGGGAACCAACACTATATTGCGTAGCTGCCTGCATCTTGTAGATCTCGCAGGAAGTGAACGAGTAGACCGTTCTGAAGCAACGGGAGATAGGTTAAAGGAGGCACAACATATAAACAAATCGCTGTCTGCCCTTGGAGATGTGATCTTTGCTTTGGCTCAAAAGAGTCAACATGTCCCATACAGAAATAGTAAATTAACACAACTTCTTCAAAGTTCATTAGGTGGCCAAGCAAAAACCCTTATGTTTGTGCAGCTTAATCCTGATATTGCTTCATATTCTGAAACAATAAGCACCTTAAAGTTTGCTAAGAGGGTTTCTGGTGTTGAGTTGGGTGCTGCACGTAGTAACAAAGAGGGGAAGGATGTCAGACAACTCATGGAACAGTTAACATATTTGAAAGATGCTGTTATGAGAAAGGATGAAGAGATGGAGCAATTGCAGATGTTCAAGGCAAATCACGAAAACTCAAAGCAGGGTATGATCTCACCAAGGCATGAATCATCAATTCATAGAAGACAACCCATAAGAACTCCCCAACTTGGCCTAAAACTTTTAGGAATTGGTGAAAAAGTTGGTTCTGACATGGGCAACTGCTCTGAGTATGATGAGAAGCATTCAGAACCAGGCTTTAGTTATTCAATGGATGAACTCAGCAAAAACCCAGATTCCCTACAGTTAAAATTAACCAGAGAAGATAAAGATAAGAATTTCAATGAGGTCGACGAGCTGTTAGGAACTGGAGATGCAAATTTTGAAGAGAGATTAAGTGACATATCAGATGGTGATCTCTCAATGGGAACAGAAACTGATCGTTCAATCAACAGTATTGTGGAGTACACCCTTTTTCCTGAAGCAGAGAAGTCAGCTGTACTTACACCACCTAGAAGGATAACCGAGACCATTCCAGCTGAGAATACAGAGAAGTCAGTGCTTTCTCTTCCCATTTATTTATTTATGAAATCATCGAGGTTGTCACTGAATAGAAGCTCCTCAAAGGTTATCTCAAGTGTAAGGAAAACCGCAACTGTTCACTGGGGGAAAATGGATTTCAGAACCAAAGAGGTGCTACTTATGACTGCTCAACTATCGTTCACAACCAGGGAACCTCATTCACATAACGTGATCTGTTCCCATTCAGCCTTTCCTATCAAGATCTTGTTAGGCTCTTTGCTTCAAGGAGATAACAAAAGATTCGAGAATATGTCTGGACACAATAGTTCACATAGAAGTAATCAGCATTCGATCAAATATAATAGAAACCAACAGAGGTTTCCACCCTTTGAAGCTGATATTTCTTGTGTAAATTACAAACCCTCTCTTTCCAATGATGATGCTAAGCAGTTCCACAAAAATCCCAACCTTAAGTCCCCAGAGATAATAAGCACAGCTCGGTTCATCTCTGCTCTAGGCCATATATGGGATTCTGCAAGTCAATCACTTTCATGTGCCAGCTCTAAGCAAATTGTGAATCAAGATGATATATGTTTCCAGAAAGGAAAAGTTCTGATTAATTATGGAGAGAAAAAAGATGAAAGGGCATACGGTTCAAATGATACTAATTACAGTGCTGTTACTGTGAGGGACGCTAGCTTTGTTTCATCCTCTATGCCAACAAACATGGCTTTCCCTAAGGTGATGCAGAAAATAGTCGCACTAGAATCTTATAATGGAAGTCAAGATTATGTTCATTCTTTATTTAAGAAAATTTTGCGAAGCTCTACAAAAATTTCAAATGAGCCTCGAAAAGCAAAGGATATTGTGAGTGAGGAAATCTCATTTAAATTGGGAAATATGTATTGGTGTATGAGTAGGACTGCTTCTAAAGGGATAAAGTATCCTGTTGATGTTGCTGAGCCTGAGAAAATGAAAACTGCTGCTCCAGTGGCTGGGGGCTGCACAATGGATGCAAGCAACCCTGCATTTGCTAATGAGAGTGATCAGTGCAATCCTGATATGACCAGATCTGATGATCTATCATCATCTAGTGATGGAATACTGGATGGGAGAAAATTTACATCTCTATCTGCAGACTACTTTCTTGGAGCTGTTCATGATACAACAGCAGATGCTGGTGTTAGTCAGACTCTATTTCCTAGTATCTGTTCAGATTATCATATTGATTCATTAGCTACATGTGATAGTGCATCTGTGGGGTGCAAACTTGCGATTGATGATAAGGAATTGTTTAATACCGAAGAAAGATACCTCTCAGATACCATAACTGACAAAGAATCCAAAGTTGAGGTCTCAGCAAAAGAGAAACCTTATCATTCCCTTGCCAAGCAAGAACATGCTTTTTCTGGGGCTTTGGCCGGTGTATGTGTCAGCCTTTGTCTACATCCTATTGACACAATCAAGACAGTCATTCAGTCATGCTGTGCCGAAAAGAAGTCCATTTTTTACACTGGAAAATTAATTGTTTCTGATAGAGGTTTGCCTGGACTTTATCGTGGGATTACTACAAGCATTGCATGCTCAGCTCCAATTTCTGCAGTGTATACTTTCACCTATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTCCCAAAGGAATATTATTCTTTTGCCCACTGTGTGGCAGGTGGTTGTGCAAGCATTGCCACCTCTTCTATTTTTACTCCAAGTGAACGAATAAAGCAGCAGATGCAGGTTTGGTCTCGTTATCGCAACTGCTGGCTTGCAATGGTTGAAATTATCAGAAAGGGTGGTTTTTATTCATTATATGCTGGTTGGGGAGCTGTACTTTGCCGGAATGTCCCACATTCAATTGTCAAGTTTTACGTATATGAAAGGTTGAAGCAAGTAATGTCATCTTTTCCACCGAGTGTAAGGCCTAACGCATTTCAGACTTTACTCTGTGGAGGATTAGCTGGATCTACTGCTGCTTTTGTCACCACACCTTTTGATGTTATCAAGACAAGATTACAGACACAGACTCCTGGATCCGTAAATCAGTATGATAGCGTGTTTCACGCCCTTTGCCAAATAGGAAAGAATGAAGGTGTGAGGGGACTGTACAGGGGACTGACTCCAAGATTAATTATATACATGTCTCAAGGATCTCTGTTCTTTGCTTCATATGAATTTTTCAAGAGACTATTTTCTTTAGAAGCATAG 3339 0.4019 MVYLDLLTIGIWNTAQPNGLVVPDASMHSVNSMKDVLELMNMGQMNRATSVTALNERSSRSHSVLTVHVRGTDLGTNTILRSCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSQHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDIASYSETISTLKFAKRVSGVELGAARSNKEGKDVRQLMEQLTYLKDAVMRKDEEMEQLQMFKANHENSKQGMISPRHESSIHRRQPIRTPQLGLKLLGIGEKVGSDMGNCSEYDEKHSEPGFSYSMDELSKNPDSLQLKLTREDKDKNFNEVDELLGTGDANFEERLSDISDGDLSMGTETDRSINSIVEYTLFPEAEKSAVLTPPRRITETIPAENTEKSVLSLPIYLFMKSSRLSLNRSSSKVISSVRKTATVHWGKMDFRTKEVLLMTAQLSFTTREPHSHNVICSHSAFPIKILLGSLLQGDNKRFENMSGHNSSHRSNQHSIKYNRNQQRFPPFEADISCVNYKPSLSNDDAKQFHKNPNLKSPEIISTARFISALGHIWDSASQSLSCASSKQIVNQDDICFQKGKVLINYGEKKDERAYGSNDTNYSAVTVRDASFVSSSMPTNMAFPKVMQKIVALESYNGSQDYVHSLFKKILRSSTKISNEPRKAKDIVSEEISFKLGNMYWCMSRTASKGIKYPVDVAEPEKMKTAAPVAGGCTMDASNPAFANESDQCNPDMTRSDDLSSSSDGILDGRKFTSLSADYFLGAVHDTTADAGVSQTLFPSICSDYHIDSLATCDSASVGCKLAIDDKELFNTEERYLSDTITDKESKVEVSAKEKPYHSLAKQEHAFSGALAGVCVSLCLHPIDTIKTVIQSCCAEKKSIFYTGKLIVSDRGLPGLYRGITTSIACSAPISAVYTFTYESVKAALLPYLPKEYYSFAHCVAGGCASIATSSIFTPSERIKQQMQVWSRYRNCWLAMVEIIRKGGFYSLYAGWGAVLCRNVPHSIVKFYVYERLKQVMSSFPPSVRPNAFQTLLCGGLAGSTAAFVTTPFDVIKTRLQTQTPGSVNQYDSVFHALCQIGKNEGVRGLYRGLTPRLIIYMSQGSLFFASYEFFKRLFSLEA 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0664 1112 Gene3D Mitochondrial carrier domain 927 1111 IPR023395 -
Lele52g0664 1112 Gene3D Mitochondrial carrier domain 808 926 IPR023395 -
Lele52g0664 1112 PRINTS Kinesin heavy chain signature 132 153 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0664 1112 PRINTS Kinesin heavy chain signature 83 101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0664 1112 PRINTS Kinesin heavy chain signature 52 69 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0664 1112 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1019 1107 IPR018108 -
Lele52g0664 1112 FunFam Kinesin-related protein3 19 224 - -
Lele52g0664 1112 ProSiteProfiles Kinesin motor domain profile. 1 182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0664 1112 Gene3D Kinesin motor domain 10 224 IPR036961 -
Lele52g0664 1112 Pfam Kinesin motor domain 16 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0664 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 221 IPR027417 -
Lele52g0664 1112 ProSiteProfiles Solute carrier (Solcar) repeat profile. 926 1009 IPR018108 -
Lele52g0664 1112 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 378 - -
Lele52g0664 1112 Pfam Mitochondrial carrier protein 1020 1109 IPR018108 -
Lele52g0664 1112 Pfam Mitochondrial carrier protein 837 918 IPR018108 -
Lele52g0664 1112 Pfam Mitochondrial carrier protein 927 1010 IPR018108 -
Lele52g0664 1112 ProSiteProfiles Solute carrier (Solcar) repeat profile. 833 917 IPR018108 -
Lele52g0664 1112 SUPERFAMILY Mitochondrial carrier 837 1104 IPR023395 -
Lele52g0664 1112 FunFam Mitochondrial substrate carrier protein-like 812 959 - -
Lele52g0664 1112 SMART kinesin_4 1 190 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0664 1112 FunFam Mitochondrial substrate carrier protein-like 960 1112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0664 Lele-ChrLele52 4201518 4209669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0664 19 216 Calmodulin-binding Proteins AT5G65930 43.216 1.34e-36 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0664 52 4201518 4209669 Lele52g0664 52 4201518 4209669 ECH
Lele50g0672 50 4130217 4138331 Lele52g0664 52 4201518 4209669 hybridization