Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0658 ATGCTTCATTTTGTTGAGGTGCTCATTACTTTCGGTTTTCTTTTCTCCGTCTTTATCAATCATTTAATCTTGCTTTGGTATTTGTTTAGCATGGGTTGTGAGTTTTCCAAGTTCTCAGCTTGCTGCTGGGGAACAGAGCAAAATGGTCCAAAAACCCACGTTGATGAAAACAAAGAGGAGCATGAAGCTAATAATTTGCCGCCATTTCGTCAATACACAATCGATCAACTTAGGATGGCCACATCTGGATTTGCAGTAGAAAATATAGTTTCTGAGCATGAAGATAAGGCTCCAAATGTGGTCTATAAAGGGAAACTTGAAAATCAAATGCAAATTGCTGTAAAACGATTTAATAGATTAGCCTGGCCTGATGCCCAGCAGTTTTTGGATGAAGCCACAGCTGTTGGTCAGCTTAGGAACCAAAAATTGGCAAATTTACTCGGCTGTTGCTGTGAAGGTGATGAAAGGTTACTTGTTGCAGAATACATGCCTAATGATACTTTGGCAAAACACTTGTTCCACTGGGAAACTCAACCTATGAAATGGGCAATGCGACTTCAAGTTGCTTTATATCTTGCCCAAGCTTTAGAATACTGCACCAACAGGGGACGTGATCTATATCATGATCTCAATGCTTACAGAGTTCTCTTTGATGTTGAAGGCAATCCTAGACTTTCATGCTTTGGTTTGATGAAAAACAGTCGAGATGGGAAAATTTATAGTACAAATCTGGCATTTGCTCCACCTGAGTATCTCAGAACAGGTAGAGTTACTCCAGAAACTGTAACATATAGTTTTGGCACCCTTTTGCTTGACCTTCTCAGTGGAAAACATATCCCTCCAAGCCATGCATTTGACCTGGTTCGGGGCAAAAACCTTCAGATGCTGACAGACTCTTGTTTAGAAGGACAATTTTCAGTTTATGGGGGAACTGAGTTGTTGCATTTAGTGTCACAATGTTTACAACCTGAACCACAAGAGCGTCCTAATCTCAAGTTATTGGTCACCGCTTTAATACCCTTACAAAAGGAATTCAAGGTCCCTTCTCATGTGCTTATGGGTATTACGCATGGTGGTGGCGCGTTACCTCTGCCACCACTCAGTGAAGCTTGTCTTAAAATGGACTTGACTGCTATACATGAGATCATAGAAAAGATCGGGTATAAAGATGATGAAGGTGTTGCAACTGAGCTTTCATTTGGAATTTGGACCAACCAAATGCAAGAAACATTGAACTTGAAGAATAAGGGTGATGCTGCATTTCGACGGAAGGACTTCAAAGCTGCAATTAATAACTACACACAGTTCTCTGAAGTCGGAACCATGATTTCTCCGACAGTTTATGCACGCCGAAGTCTATCTTATCTTATGAATGATATGCCTGAGGAAGCACTTGACGATGCATTGCAGGCACAAGCAATATCCCCTCTCTGTTCTCCTGTTCCAGAAGACAACATACGTAGACCAACACCCTGCAGAGAGAAATCACAGGAGAAACATACAATATTATGGGGTGCCTGTCGCAGTTCAGTTGCCTGTTCTAATACAAAGATCTTGAAAGGTTTAAGGAAAAACTTATGGTAG 1584 0.411 MLHFVEVLITFGFLFSVFINHLILLWYLFSMGCEFSKFSACCWGTEQNGPKTHVDENKEEHEANNLPPFRQYTIDQLRMATSGFAVENIVSEHEDKAPNVVYKGKLENQMQIAVKRFNRLAWPDAQQFLDEATAVGQLRNQKLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLQVALYLAQALEYCTNRGRDLYHDLNAYRVLFDVEGNPRLSCFGLMKNSRDGKIYSTNLAFAPPEYLRTGRVTPETVTYSFGTLLLDLLSGKHIPPSHAFDLVRGKNLQMLTDSCLEGQFSVYGGTELLHLVSQCLQPEPQERPNLKLLVTALIPLQKEFKVPSHVLMGITHGGGALPLPPLSEACLKMDLTAIHEIIEKIGYKDDEGVATELSFGIWTNQMQETLNLKNKGDAAFRRKDFKAAINNYTQFSEVGTMISPTVYARRSLSYLMNDMPEEALDDALQAQAISPLCSPVPEDNIRRPTPCREKSQEKHTILWGACRSSVACSNTKILKGLRKNLW 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0658 527 Gene3D Phosphorylase Kinase; domain 1 56 162 - -
Lele52g0658 527 ProSiteProfiles Protein kinase domain profile. 87 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0658 527 FunFam probable serine/threonine-protein kinase At5g41260 164 355 - -
Lele52g0658 527 Gene3D Transferase(Phosphotransferase) domain 1 164 356 - -
Lele52g0658 527 Gene3D Tetratricopeptide repeat domain 404 488 IPR011990 GO:0005515
Lele52g0658 527 SUPERFAMILY TPR-like 410 477 IPR011990 GO:0005515
Lele52g0658 527 SUPERFAMILY Protein kinase-like (PK-like) 63 346 IPR011009 -
Lele52g0658 527 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 50 477 IPR045845 GO:0004672|GO:0009742
Lele52g0658 527 FunFam probable serine/threonine-protein kinase At4g35230 59 162 - -
Lele52g0658 527 Pfam Protein tyrosine and serine/threonine kinase 101 337 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0658 Lele-ChrLele52 4156280 4162242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0658 45 338 Glycoside Hydrolase AT3G07070 32.822 8.98e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele52g0658 PK_Tyr_Ser-Thr 2.8e-24 CL0016